Xenopus tropicalis (tropical clawed frog): 493565
Help
Entry
493565 CDS
T01011
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03420
Nucleotide excision repair
xtr04115
p53 signaling pathway
xtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
493565 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
493565 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
493565 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
493565 (ddb2)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
493565 (ddb2)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
493565 (ddb2)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
493565 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_RFWD3
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
493565
NCBI-ProteinID:
NP_001008203
Xenbase:
XB-GENE-971828
UniProt:
Q66JG1
LinkDB
All DBs
Position
4:15444853..15452824
Genome browser
AA seq
501 aa
AA seq
DB search
MPPKRATRGRRNVELSSEEEEEQEEVSPGKRKRDIEKNGEARLKKPSKKRSGQQCASDVP
CSSKESDCGTNLTNKGDKQRSIVHYLYRSTLGGNVRAKYLQTPFLRSLASYILYRTNSPF
DRRVTTLEWHPTHPNTVAVGSKGGDIILWDYEELNNTLIPGIGAGGCITGMKFDPFNPNQ
LYTSSVAGSTVLQDFSGRNIQTFTNTEDWAMWYCSLDVSAERQCVVTGDNVGNVVLLETC
GKEIWKLRLHKKKVTHVEFNPRCDWLLASASVDQTVKLWDLRNIKDKSSYLYTLPHARGV
NSAYFSPWDGAKLLTTDQHSEIRVYSACDWAKPQHIIPHPHRQFQHLTAIKATWHPRYDL
IVVGRYPDPLFPGYMSDELRTVDVFDGQKGNIVCQLYDPYASGIVSLNKFNPMGDLLASG
MGFNILIWSREILLMMKQEEMMKALREKGVSVGRKELPNSRLPHSSAPREKPGNKGSTTE
SSKTRTVRESSKRGKHKDPGK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaaaagagcaacacgtgggaggaggaatgtggagctgtcttcagaggaggaa
gaggagcaggaagaagtttccccaggaaaaaggaaacgggacatagagaaaaatggtgaa
gccaggctcaagaaaccctctaagaagagaagcgggcagcagtgtgcctcagatgtacca
tgcagcagtaaagagtccgactgtggtacaaacctcactaacaaaggagacaagcagaga
agcatcgtgcactacctgtatcgcagcactctggggggcaatgtccgggcaaagtacctg
caaaccccttttctccggtccctggcttcatacatattatatcggaccaacagccccttt
gatcgcagagttaccactcttgagtggcaccctacgcacccgaatacagtggcggtggga
tcaaaaggaggagacatcattctgtgggactatgaagagctcaataacaccctcattcct
gggattggagccggggggtgcatcaccggaatgaagttcgacccgtttaaccctaatcag
ttgtacacctcatcagtggcgggtagcaccgtgctacaggacttctctgggcgcaatatt
cagacattcaccaacactgaggactgggcgatgtggtactgcagcctcgatgtttccgct
gaaaggcagtgtgtggtcacgggggataatgtaggcaacgtggtcctcctggagacctgt
gggaaggagatctggaagttacggcttcacaaaaagaaagtgacgcatgtagagtttaac
cctcgctgtgattggctgctggcgtccgcttctgtggatcagaccgtgaagctgtgggac
ctgcgcaatatcaaagacaagtccagctacctgtacacattgcctcatgcacgtggcgtc
aactctgcttattttagcccctgggatggggcaaagctactcactaccgatcagcacagt
gagatccgtgtctattctgcgtgtgattgggccaaaccgcagcacataatacctcatcca
caccggcaattccaacatttgactgcaattaaggccacgtggcatcctcgctatgattta
atagttgttggccgatacccagacccgctctttccaggctatatgtcagatgagcttcgg
acggtagatgtgtttgatggacagaaagggaatattgtatgccagctgtatgacccttat
gcttctggtattgtttcgctcaacaaatttaatccaatgggagatcttctggcttctggc
atgggttttaatatcttgatttggagccgggagattctgttgatgatgaagcaggaggag
atgatgaaggctttgagggagaagggggtttcagtgggaaggaaggaacttccgaattcc
agattgccacattccagcgctcccagagagaagcctgggaataaaggcagcaccacggag
agcagcaagacccggactgtgagggaatcttctaaacgtgggaagcacaaagacccgggc
aaatga
DBGET
integrated database retrieval system
