Xenopus tropicalis (tropical clawed frog): 496448
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Entry
496448 CDS
T01011
Symbol
cltc
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142
Lysosome
xtr04144
Endocytosis
xtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
496448 (cltc)
04142 Lysosome
496448 (cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
496448 (cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
496448 (cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
496448 (cltc)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
496448 (cltc)
Exosome [BR:
xtr04147
]
Exosomal proteins
Proteins found in most exosomes
496448 (cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
496448
NCBI-ProteinID:
NP_001011039
Xenbase:
XB-GENE-984047
UniProt:
Q5XHB7
LinkDB
All DBs
Position
2:91258171..91322648
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDANN
PIRRPISADNAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPETIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRINPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTLSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HATDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLVE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMREYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVPVPPQAAYGYGYTAPAYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctcccgatccgcttccaggagcacctgcagctccaaaatctgggtatt
aatccagccaacattggttttagtacccttacaatggagtctgataaattcatctgcatt
cgggagaaggtaggagagcaagcccaggtggtaattattgacatgaatgatgccaacaac
ccgattcgcaggcctatttcagctgataatgccataatgaatccagccagcaaggtcatt
gctctgaaagccggaaaaacactccaaatttttaacattgaaatgaaaagcaagatgaag
gcccacaccatgacagatgatgtcaccttctggaaatggatctctttgaatactgtcgcc
ttagtgactgacaacgcagtctatcattggagtatggagggggaatctcagccagtaaag
gtgttcgaccgtcattcaagcttggcaggctgccagatcattaattatagaacagatgca
aagcaaaagtggctacttctgactggaatatctgcccagcaaaaccgtgttgtgggagcc
atgcagctttactccgtagacaggaaagtgtcccagcccatcgaaggacatgctgccagc
tttgctcagttcaagatggaaggaaatgctgaagaatcaaccctcttctgctttgctgta
aggggtcaagctgggggaaagctccatattatagaagttggtacaccacctacaggcaac
cagccttttccaaagaaagctgttgatgtcttctttcctccagaagctcagaatgacttt
cctgttgccatgcagattagtgacaagcatgatgttgtttttctgattacaaaatatggc
tacattcatctttacgacctagaaaccggaacctgcatttatatgaatcgtataagtggg
gaaaccatctttgttactgctcctcatgaagccacagctggaatcatcggagtaaacaga
aaggggcaggttctttctgtgtgtgttgaagaggagaacataatcccatatatcacaaac
gttctgcagaaccctgatctagccttgcgtatggctgtaagaaacaaccttgctggagct
gaggagctttttgctcgtaaattcaacgctctctttgcacagggaaattattcagaagca
gcaaaggtggctgcaaatgccccaaagggaatactacgtacaccagaaactatccgccgt
ttccaaagtgttcctgcacaaccaggtcaaacctccccattgctgcaatattttggaatt
cttttagaccaaggtcagctcaacaagtttgaatccttggagctttgcagacctgtgttg
caacaaggtcgcaaacagcttttggagaaatggctcaaggaagacaagctggagtgttct
gaagaattgggagatcttgtaaagtctgttgaccctacacttgccttgagtgtttatctg
agggctaatgttccaaacaaagtaattcagtgctttgcagagactgggcaggttcagaag
attgtgctctatgcaaagaaggtgggctatacacctgattggattttcctgctgcgaaat
gttatgagaatcaatccagatcaaggccaacagtttgctcaaatgttggtccaagatgag
gagcctcttgcagatatcacccagattgtggatgtctttatggaatacaaccttatccag
caatgcactgctttcttactggatgctctaaaaaataaccgtccaacagaaggccctttg
caaactcgtctccttgaaatgaatctgatgcatgcacctcaggtggctgatgcgattttg
ggcaaccagatgtttacacattatgatcgtgctcacattgcacagctttgtgagaaggca
ggcctccttcagagagctttggaacattttactgatctttatgacattaaaagggcagtt
gtccacactcatcttttgaatccagagtggctggtgaattattttggctccctgtctgtt
gaagattctcttgaatgcttgcgtgccatgctctctgcaaacatccggcaaaatttgcag
atatgtgtccaagtagcttccaaataccatgagcagctttccactctgtcgcttattgaa
ctttttgaatctttcaagagcttcgaagggctgttttattttctgggctctattgtcaac
ttcagccaggatcccgatgtgcattttaaatatatccaggcagcctgcaaaactggtcag
attaaagaagttgaaaggatatgtagagagagtaactgttatgatcccgagcgagtgaaa
aacttcctaaaggaagccaagctcacagaccagctgccactgataattgtatgtgatcgc
ttcgactttgtgcatgatcttgtgctgtatctgtacaggaacaacctacagaaatacatt
gagatctacgttcaaaaggtaaacccaagtcggttgccagtagttattgggggccttctt
gatgtggattgctcagaagatgtaattaagaaccttatccttgttgtgaggggacagttc
tctacagatgagcttgttgctgaagttgagaaaagaaacaggttaaaactccttttgcca
tggctggaatctcgaattcatgagggatgcgaagagcctgctactcataatgctttggct
aaaatatacatagatagcaataataatcctgaacgattcctacgagagaacccatactac
gacagtcgtgttgttggaaagtattgtgaaaaaagggatccccatcttgcatgcgttgca
tatgaacgaggacagtgtgacctggaactaataaatgtttgcaatgaaaattctcttttt
aaaagcctgtcccgttaccttgtacgtcgcaaagatccggaattgtgggccagtgtcttg
ttggaaagcaacccatataggagacctctaattgatcaggttgtgcagactgctttgtct
gaaacacaggatcctgaagaggtgtctgttactgtaaaagcctttatgacagcagacctt
cctaatgagctcattgaattgttggagaaaattgtgttggacaactctgtctttagtgaa
cacagaaatctgcagaacctcttgattctgactgcaattaaagctgaccgcacaagggtc
atggagtatattaaccgcctagataactatgatgccccggacattgcaaacattgccata
agcaatgagctgtttgaggaagcatttgctattttcaggaaatttgatgtgaacacttca
gctgtgcaggttctgattgaacacattgggaatttggaccgggcatatgagtttgctgag
cgatgcaatgaaccagctgtttggagtcagcttgccaaagcgcagttacagaaagggatg
gtcaaggaagctattgattcctacattaaagcagatgatccttcttcttacatggaagtt
gttcaagctgccaatgctagtggaaactgggaggagttggtcaaatacctgcaaatggct
cgcaaaaaggcacgagaatcctatgtggaaacagagctcatatttgctcttgctaaaaca
aatcgccttgcagaactagaagagttcattaatggaccaaataatgctcacattcagcag
gttggtgatcgctgctatgatgaaaaaatgtatgatgctgctaagctcctctataacaat
gtttccaattttggacgcttggcatccactttggttcacttaggagagtatcaagcagct
gtggatggtgctcgtaaggcaaatagcacacgcacttggaaagaggtttgctttgcttgt
gttgatggaaaagagtttcgcctagcacagatgtgtggtcttcatattgtggttcatgct
gatgaattggaggagcttataaattattaccaggatcgagggtattttgaagaacttatc
actatgttggaggcagctcttggactggaaagggcacacatgggaatgttcactgaactt
gcaatcctctactctaaatttaaaccccagaaaatgcgggagcacttggagctgttctgg
tcaagagtcaatattcctaaggtgctaagagcagcagagcaggctcacttgtgggcagaa
ttagtattcctgtatgataagtatgaagagtacgacaatgctatcatcacaatgatgaac
cacgccacagatgcatggaaggaaggacaatttaaagacatcattacaaaggttgcaaat
gttgaattgtattacagagcaatccagttttacttggagttcaagccactgttactgaat
gatcttctgatggtgctctcaccaagacttgaccacacccgtgcagtaaattatttctcc
aaggtgaaacaacttcctctggtaaaaccatatctgcgttcagttcagaatcacaacaac
aaatctgtgaatgaggctttaaacaatctgttcattacagaagaagattaccaggcactt
cggacatctatagatgcatatgacaactttgataatatttcccttgctcaacgactggag
aagcatgagctaattgaatttagaagaattgctgcatatctattcaagggcaataatcgt
tggaagcaaagtgtggagctttgtaaaaaagacaggctttacaaggatgctatgcagtat
gcctctgaatccaaagatacagaattggcggaggagcttctgcagtggtttttggttgag
gataaaaaggaatgctttgcagcctgtctctttacctgctatgacttgctgcgaccagat
gttgtcttggaaacagcatggaggcacaacatcatggactttgccatgccctacttcatt
caggtcatgagggagtacttaactaaggttgacaaactggatgcctccgaatctcttaga
aaagaagaagagcaagcaacagagacccagcccattgtttatggccagccacagctgatg
ttgactgcaggacccagtgttccagtacctcctcaagctgcgtatggctatggctatact
gcacctgcatatgggcaacctcaacctggctttgggtattccatgtaa
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integrated database retrieval system
