Xenopus tropicalis (tropical clawed frog): 496556
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Entry
496556 CDS
T01011
Symbol
eif4a1
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
496556 (eif4a1)
03012 Translation factors [BR:
xtr03012
]
496556 (eif4a1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
496556 (eif4a1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
496556 (eif4a1)
mRNA cycle factors
Stress granule specific factors
496556 (eif4a1)
Translation factors [BR:
xtr03012
]
Eukaryotic type
Initiation factors
eIF-4
496556 (eif4a1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
496556 (eif4a1)
Exosomal proteins of bladder cancer cells
496556 (eif4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
Flavi_DEAD
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
496556
NCBI-ProteinID:
NP_001011139
Xenbase:
XB-GENE-491256
UniProt:
Q5XGH1
LinkDB
All DBs
Position
3:complement(152586557..152595611)
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AA seq
406 aa
AA seq
DB search
MSASYESRPRDNGPEGMEPDGVIESNWNEVVDSFDDMSLSESLLRGIYAYGFEKPSAIQQ
RAIMPCIKGYDVIAQAQSGTGKTATFAISILQQIELDMKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQSEAPHIVVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLSSNAQVVLLSATMPADVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
ALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEDDKRTLKDIETFYNTTVEEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagctacgagagtcgacccagagacaatggacccgaaggcatggagcccgat
ggggtcattgagagcaattggaatgaagtcgttgatagttttgatgacatgagcctatca
gagtctctgcttaggggtatttacgcctatggctttgagaaaccctcagccatccagcag
cgagctattatgccttgtatcaagggttatgatgtcattgctcaagcacagtctggaact
gggaaaactgccacctttgccatttccattcttcaacagatagaactggatatgaaagcc
acacaggccctggtgttggcaccaacccgtgagctggcccagcagatccagaaagtagtt
atggccctcggagattacatgggtgcctcttgccacgcctgcattgggggcaccaacgta
agggccgaagtacagaagctgcagtcagaagcccctcatatagttgtgggcacccccggc
agagtgttcgacatgttaaacaggcgttacctgtcccctaaatacataaagatgttcgtg
ttggatgaagccgacgagatgttgagtagaggtttcaaggatcaaatctacgacatattc
cagaagctgagcagtaatgcccaggtggttttgctctcggccaccatgcccgccgacgtg
ctcgaggtgaccaagaagttcatgcgggaccccatccggatcctggttaaaaaggaggag
ctgaccctggagggtattaggcagttctacatcaacgtggagcgagaggagtggaagctg
gacacattgtgtgacctgtacgagacactgaccatcacgcaggccgtaatcttcataaac
acgcgccggaaggtggattggctgacggaaaagatgcacgcgagggacttcactgtctcc
gccctgcacggcgacatggaccagaaggagagagacgtcattatgagggagttccgatct
ggatccagtcgggttctgattaccacagatttgctggcccgaggcattgatgtccagcag
gtctcactggtcattaactatgatctgccgaccaacagggagaactacatccacaggatt
ggccgagggggccgtttcggtaggaaaggagttgccattaacatggtgacagaggatgac
aagcgcacgctgaaagacatagagactttctacaacaccacagtcgaggagatgcccatg
aacgtggccgacctcatctaa
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integrated database retrieval system
