Xenopus tropicalis (tropical clawed frog): 496567
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Entry
496567 CDS
T01011
Symbol
epcam
Name
(RefSeq) epithelial cell adhesion molecule precursor
KO
K06737
epithelial cell adhesion molecule
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
496567 (epcam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
496567 (epcam)
04090 CD molecules [BR:
xtr04090
]
496567 (epcam)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
496567 (epcam)
Exosomal proteins of colorectal cancer cells
496567 (epcam)
CD molecules [BR:
xtr04090
]
Proteins
496567 (epcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPCAM-Trop-2_C
Thyroglobulin_1
DUF4381
EpCAM_N
EphA2_TM
Stevor
PMP1_2
DUF6377
Syndecan
DUF3377
TM_ErbB1
Protocadherin
Motif
Other DBs
NCBI-GeneID:
496567
NCBI-ProteinID:
NP_001011149
Xenbase:
XB-GENE-986667
UniProt:
Q5U4Z2
LinkDB
All DBs
Position
5:20744433..20751094
Genome browser
AA seq
312 aa
AA seq
DB search
MHLSTVLRLGAALLCFALVAQAQSPGCTCSTLYMGKCDNSGAGGCQCTLAIGTATQSINC
SALIPKCWLMKRESLGTKAGRRVKPVQALVDNDGLYDPECDVNGVFKARQCNNTDTCWCV
NSAGVRRTDKGDKNWKCPELVKTNWVIVEMKRNGTESVSDADLIQALKTTITNRYGLPDK
YISVELETPLIYIDLKQNTSQKLPGEVDITDVAYYMEKDVKGDSLFPANNQFQILANGNK
ISVKEPMIYYIDEKPHEISMRHLTPGVIAVIVVVVLAVVALIAVLIFTRRKKARYQKAEM
KELNEMQKEVST
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaagtaccgtactgcggctgggggctgccctcctctgctttgccctggtagcc
caagcccagagcccaggatgcacatgtagtacactctacatgggtaaatgtgataacagc
ggagctggaggttgtcagtgtaccctcgctataggcactgcaacacagtctataaactgc
tcagcattaattccaaaatgttggttgatgaagagagagagcctcgggacaaaagcagga
cgcagagttaaaccagtacaagcgcttgttgacaacgatgggctgtatgatccagagtgt
gacgttaatggggtgtttaaggccaggcagtgcaacaatacagacacctgctggtgtgtc
aatagcgccggggtcagaagaactgacaaaggagacaaaaactggaagtgcccagagctg
gtcaaaactaactgggttatcgttgaaatgaaacgcaatggcaccgaatctgtgagtgat
gccgacttgattcaagcacttaaaaccacaataactaatcgatatggattgcctgacaaa
tatatctctgttgagcttgagactcctttaatctacattgacttaaaacaaaacacttcc
cagaagcttccaggagaggttgacattacagatgttgcctattatatggaaaaggatgta
aagggtgattccctgttcccggcaaacaaccaatttcaaattcttgcaaatggaaacaaa
attagtgttaaggaacctatgatctactatattgatgagaagccacatgagatctctatg
agacacctaacccctggggtcattgcagtcattgttgtcgtggtcttggcagttgttgct
ctgatagctgtgttgatctttacaagaagaaagaaggcaaggtatcagaaggctgagatg
aaggagctgaatgaaatgcagaaagaagtaagcacataa
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integrated database retrieval system
