Xenopus tropicalis (tropical clawed frog): 496607
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Entry
496607 CDS
T01011
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
496607 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
496607 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
496607 (snf8)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
496607 (snf8)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
496607 (snf8)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
DnaD_N
EutK_C
AbiEi_4
RPA_interact_C
Sigma70_r1_1
DUF4896
DUF4423
Motif
Other DBs
NCBI-GeneID:
496607
NCBI-ProteinID:
NP_001011185
Xenbase:
XB-GENE-961618
UniProt:
Q5RJU0
LinkDB
All DBs
Position
10:complement(12244705..12250654)
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AA seq
257 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLLQMSKQLEMFKTNLEEFASKHKQEIRK
NPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHHNGGLIT
LAELHQHVLKGRGKLAQDVSQDDIIRAIKKLKVLGNGFGIIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGFVTVNEIKSSLNWETERAKHVLEHLLKEGLAWIDSQAQGEAQYWLPALF
TALYAQQINMDENGGPS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaagaggggtgggagcgggggctatagccaagaagaaactggcggaggccaag
tacaaggagcgaggaacggttcttgctgaagatcagctgcttcagatgtccaagcagttg
gaaatgttcaaaaccaatttggaagagtttgccagtaagcacaagcaagagatccgtaaa
aaccctcagttcagagtccagttccaggatatgtgtgctacgattggtgtggatcctctt
gcctctggcaaaggattctggtcagaaatgctgggcgttggagacttttattacgaactc
ggggttcagataattgaagtgtgtctggctctaaaacaccacaatggaggtctgattacc
ctggctgagctccatcagcatgtactgaaaggcagagggaaacttgcacaggacgttagt
caggatgatatcattcgggcaattaaaaagctaaaagtacttggtaatggatttggcatc
atccctgttggaggttcttatttagtccagtcagttcctgctgagctaaacatggatcac
acagtagtattgcagttagcagagaaaaaaggatttgtaacagtaaatgaaattaaatca
agtttaaattgggaaaccgaaagagccaaacatgttctggaacacttactaaaggaaggc
ttggcttggatagactctcaggctcaaggtgaagcccagtactggctgccagctctcttt
actgcactttatgcccaacaaattaatatggacgagaacggaggaccttcttga
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integrated database retrieval system
