Xenopus tropicalis (tropical clawed frog): 496617
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Entry
496617 CDS
T01011
Symbol
hes1
Name
(RefSeq) transcription factor HES-1
KO
K06054
hairy and enhancer of split 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03460
Fanconi anemia pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
496617 (hes1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
496617 (hes1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
496617 (hes1)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
496617 (hes1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
496617 (hes1)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
496617 (hes1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
496617
NCBI-ProteinID:
NP_001011194
Xenbase:
XB-GENE-487995
UniProt:
Q5PPM5
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Position
5:complement(106987449..106989866)
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AA seq
267 aa
AA seq
DB search
MPADLMEKNSSSPVAATPASMSNTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSTDPSVLGKYRAGFSECMNE
VTRFLSTCEGVNTDVRTRLLGHLANCMNQINAMNYPTQPQIPAAAAPHPAYGQPLVQLQG
AAPQSSPAPIACKMGGPPVEAAKVYGGFQLVPAPDGQFAFLITNPAFPHNGSVIPVYTNS
NVGTALPPSVSPSVMPSVTADSVWRPW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgatctgatggagaagaactcttcatccccagtggctgccactccggccagc
atgagcaataccccggataaacccaaaacagcctctgagcatagaaagtcctccaagccc
atcatggagaagagaaggagagccaggattaacgagagcctcggccagctcaaaaccctc
atcctggatgctctcaagaaagatagctcccggcactctaagctggagaaggccgatata
ctggagatgacagtgaagcacctgaggaacctgcagcgggtgcagatgactgctgcactg
agcacagacccttcagtgctgggcaagtacagagctggattcagcgagtgcatgaatgaa
gtaactcgattcctgtcaacttgtgaaggggtcaacacagatgtccggacccgactcttg
gggcatcttgccaactgcatgaatcagatcaatgccatgaattatcctacccagccccag
atccctgctgcagctgcaccccaccctgcctatggacagcctttggtccagctccaagga
gcagctccacagagcagcccagctcccattgcatgcaagatgggtggtccaccagtagaa
gctgccaaagtgtatggaggcttccagcttgtgccagccccagatggacagtttgccttc
ctgatcacaaacccagccttccctcacaacggatccgtcattcctgtgtacaccaactcc
aatgtgggcactgcattgccaccttcagtgtctccttcagtaatgccatcagtcacagct
gactccgtttggaggccctggtaa
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