Xenopus tropicalis (tropical clawed frog): 496656
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Entry
496656 CDS
T01011
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136
Autophagy - other
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
496656 (wipi1)
04136 Autophagy - other
496656 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
496656 (wipi1)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
496656 (wipi1)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
496656 (wipi1)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
496656 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_HPS5
WDR55
Beta-prop_WDR19_1st
Beta-prop_Vps41
BCAS3_WD40
EIF3I
Beta-prop_WDR19_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
496656
NCBI-ProteinID:
NP_001072161
Xenbase:
XB-GENE-5920753
UniProt:
Q0D2E7
LinkDB
All DBs
Position
10:50559283..50578024
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AA seq
433 aa
AA seq
DB search
METGGGGEGAGDICCLSYNQDCTSLAIGMRSGYKLYSLSNVERLDLVHESWEVKDVYIVE
RLFSSSLVVVVSHAKPRQMNVLHFKKGTEICNYNYSGNILSIRLNRQRLIVCLEESIYIH
NIKDMKLLKTLLDTPRNPHGLCALSINHSNSFLAYPGSSSSGEVSVYDANCLKCECTIPA
HDSPLAAIAFNSTGTKLASASEKGTVIRVFSIPEGQKLYEFRRGMKRYVSISSLVFSMDS
QFLCASSNTETVHIFKLEHLPDRPEENATWTGYVGKMFMAASNYLPAQVSDMMNQDRAFA
TVRLNFSGQKNACTLVTIQKLPRLLVTSASGHLYVYNLDPQDGGECVLIKKHSLLGSAKS
ETDGDSDAESPVPVTYAATVARPSSAPPTSTMTGYSEDVGALRGEIIPEHELAVGPICLD
DEKEFPPVSIKKP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagggggcggagagggagccggggacatctgctgtctgtcctacaaccag
gactgcacgtccctggctatcggcatgaggtcgggctacaaactctactctctgagcaac
gtcgagcgtctggatctcgtgcacgagagctgggaggtgaaggatgtttacatcgtggag
cgcctgttctccagcagtctggtggtggtggttagtcacgccaagccgcgccagatgaac
gtgttgcacttcaagaagggcacagagatctgtaactataactactccggcaacatctta
tccatcaggctgaaccgccagaggctgattgtgtgtttggaggaatcgatctacatccat
aacattaaggacatgaagctgctgaagacgttgctggacaccccccggaacccccatggc
ctctgtgctctgtcaatcaaccattccaactccttcctggcctatcctggcagctcctcc
tcgggggaagtctccgtgtacgatgccaactgcttgaagtgcgagtgcacgatcccggcc
cacgacagcccccttgctgctatcgccttcaactctacgggaacaaaactggccagtgct
tcagagaaaggtacggtgattcgcgtcttttccattcctgaggggcagaagctctatgag
ttccgcagagggatgaagagatacgtgagcattagctctttggtattcagtatggactcc
cagttcctttgcgcctccagcaacactgagaccgtccacatcttcaaactggaacacctg
cccgacaggccagaagagaatgccacatggacaggctatgtaggaaagatgtttatggct
gcttctaactacctcccggcacaagtctccgacatgatgaaccaggatcgcgccttcgct
acagttcgactgaatttttcgggacagaaaaacgcatgcaccttggtcacaattcagaag
ctcccgcggcttctggtcacgtcggccagcggccacctctatgtgtataacctggaccca
caggacgggggcgagtgtgtccttatcaagaaacacagcctgttgggttccgccaagtca
gagaccgatggagacagcgacgccgagagcccggtacctgttacctacgcggccaccgta
gcccggcccagctctgccccgcccacatccaccatgacaggttactccgaggatgtgggc
gccctgcggggagagattattccggaacacgagttggcggttggacccatttgcctggac
gacgagaaagaattcccacccgtgagcattaagaaaccctag
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