Xenopus tropicalis (tropical clawed frog): 496706
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Entry
496706 CDS
T01011
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
496706 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
496706 (syf2)
Spliceosome [BR:
xtr03041
]
Complex B
Other components
Prp19-related factors
496706 (syf2)
Complex C
496706 (syf2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
496706
NCBI-ProteinID:
NP_001032340
Xenbase:
XB-GENE-920839
UniProt:
Q28G05
B0JZS8
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All DBs
Position
6:complement(37286800..37293833)
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AA seq
249 aa
AA seq
DB search
MKSPSAAVTEDNETAGVSSKAESPPASTEDLAAQKREARLRKFRELHLKTNEARKLNHQE
VVEEDKRQKLPSNWEARKARLEWELKEEEKKRECAANGVDYERAKLLEISAEDAERWERK
KKRKNPDLGFSDYAAAQLRQYQRLTKQIKPDMEEYEMEKQKQGEMFYPTSESLYHGTHIP
SQSGIDRMVTDLEKQIEKREKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIK
QNLERGTAV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaccgagtgcagctgttacagaggataacgagacggcaggggtttcctctaag
gcagagtctccgccagccagcactgaggatttggctgcccaaaagagagaagcaagatta
agaaaatttcgagagctgcacttgaaaacgaacgaggctcgaaagttaaatcaccaagaa
gtagtagaagaagacaaacgacaaaaattgccgagtaactgggaggcacggaaagcccga
ttagaatgggagcttaaagaagaagagaagaaaagggaatgtgcagctaatggtgttgac
tatgagcgggcaaagctattggaaataagcgcagaagatgctgaaaggtgggagaggaaa
aagaagagaaaaaatcctgacctgggattttcagattatgcagcagcacagctacgccaa
tatcagaggctgacaaagcaaattaaaccagatatggaggaatacgagatggagaaacag
aagcaaggtgaaatgttctatcccacgtcggaaagtttgtaccatggtactcacataccc
tcccaatctgggattgacagaatggtcacagatcttgaaaaacagattgaaaaacgtgaa
aaatacagccgcaggcgtgcatacaacgatgatgctgatattgactacattaatgagagg
aatgcaaaattcaacaagaaggcagagagattttatggcaaatacactgcggagatcaaa
cagaacttggaaagagggactgctgtctaa
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