Xenopus tropicalis (tropical clawed frog): 496783
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Entry
496783 CDS
T01011
Symbol
idi1
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00900
Terpenoid backbone biosynthesis
xtr01100
Metabolic pathways
Module
xtr_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
xtr_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
496783 (idi1)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
496783 (idi1)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
496783
NCBI-ProteinID:
NP_001011323
Xenbase:
XB-GENE-492551
UniProt:
Q5M8E5
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Position
6:complement(19289045..19294052)
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AA seq
227 aa
AA seq
DB search
MPEINTDSLDQQQVMLLAEMCILINEDDQKIGADTKKNCHLNSNIDKGLLHRAFSVFLFN
SENKLLLQQRSEAKITFPGCYTNTCCSHPLNTPLETEEGNAIGVRRAAQRRLKAELGIPM
EQVMPDELKYLTRIHYKAQSDGIWGEHEIDYILFVQKDVALDPDPNEIQTHCYVSKEDLR
QLLDKAKRGEVKITPWFQLIADTFLFKWWDNLQNLQKFEDHDQIHHM
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagataaacacagattcgctggaccagcagcaggtgatgcttctggcagagatg
tgcatacttatcaatgaggacgaccagaagatcggagcagacacaaagaaaaactgccat
ctgaacagcaacatcgataagggcttgctccaccgagcattcagcgtcttcctgtttaac
tctgaaaacaagctattgctgcagcagcgctctgaagcaaaaataacatttccaggctgc
tacacaaacacttgctgcagtcacccattaaatactcccctggagactgaggaagggaat
gccatcggggtgaggagagcggcacagagacggctgaaagctgaactggggatccccatg
gagcaggtgatgccagatgagctgaagtacctgactcgtattcattacaaagctcagtcg
gacgggatctggggagaacatgaaattgattacattctgtttgtgcagaaggatgttgca
ctagaccctgaccccaatgagatccagacccattgctatgtgtccaaggaagatctcagg
cagttgctggacaaggctaaacgcggggaagtaaagatcaccccatggtttcagctcatc
gcggacactttcctctttaagtggtgggataatctgcagaacctgcagaagtttgaggat
catgatcaaatccatcacatgtga
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