Xenopus tropicalis (tropical clawed frog): 496788
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Entry
496788 CDS
T01011
Symbol
wdr45
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
496788 (wdr45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
496788 (wdr45)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Other autophagy associated proteins
Others
496788 (wdr45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40
WD40_Prp19
WDR55
Beta-prop_EML
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
CNH
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
496788
NCBI-ProteinID:
NP_001011326
Xenbase:
XB-GENE-972376
UniProt:
Q5M8E0
LinkDB
All DBs
Position
2:136090396..136098174
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AA seq
329 aa
AA seq
DB search
MVYTNTLSYLTLCLSDQEQVGSVGQVEMLHRCNLLALVGGGSNPKFSDISVLIWDDSRDG
KDKLVLEFTFTKPVLSVRLRSEKIVIALKNRIYVYSFPDNPTKLFEFDTRDNPKGLCDLC
PSLEKQLLLFPGHKCGSLQLVDLCNAKPGSSSAPFTINAHQSELGCLAVNQQGTLVASAS
RKGTLIRLFDTQTREQLVELRRGTDPATLYCINFSHDSSFLCSSSDKGTVHIFALKDTKL
NRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGKNTSKNVNSVIAVCVDGT
FHKYVFTPEGNCNREAFDVYLDICDDDIF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtatacacaaatactctgtcttatcttaccttatgtctttcagatcaggagcaggtg
ggcagtgtaggacaagtagagatgttgcacagatgcaatctgctggctctggtgggaggt
ggaagtaatccaaaattctcagatatatcagtattgatttgggacgattctcgtgatggg
aaagataagttggtccttgaatttaccttcactaaacctgtgctgagtgtgcgccttaga
tctgagaagattgtcatagccttgaagaatcgaatttatgtctattcttttcccgacaat
ccaaccaaactctttgaatttgacacacgggacaaccccaaaggtctttgtgacctatgc
cctagtctggagaagcaactgttgctgttcccaggccataagtgtggcagccttcaactt
gtggatctgtgtaatgcaaagcctggcagttcatcagcaccattcacaattaatgctcat
cagagtgaactaggatgcctggcagtcaatcagcagggaactctggtagcttctgcctca
cgcaaaggaacattaatccgtctctttgacacccaaacacgggaacagcttgtggaactc
cgtcggggaacagacccagccactctgtactgtataaatttcagccatgacagctccttt
ctctgcagttccagtgataaaggcactgtacatatatttgccctgaaggataccaagctt
aaccgccgatcagctttggcacgtgtaggaaaagttggccctatgatcggtcaatatgtg
gattcacagtggagtttggccagctttactgtgcctgcagaatctgcctgtatctgtgct
tttggcaagaacacctccaaaaatgtcaactcagtcatagcggtctgtgtggatggaaca
tttcacaaatatgtcttcacaccagaaggaaactgtaaccgtgaggcctttgatgtgtat
ctggacatttgtgatgatgatatcttctaa
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integrated database retrieval system
