Xenopus tropicalis (tropical clawed frog): 496795
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Entry
496795 CDS
T01011
Name
(RefSeq) uncharacterized protein LOC496795
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
496795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
496795
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
496795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
KRAB
zf-C2H2_6
zf-met
Zn-ribbon_8
C2CH-3rd_BIRD-IDD
XPA_N
Zn_ribbon_SprT
zf-BED
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
496795
NCBI-ProteinID:
NP_001011332
UniProt:
Q5M7S6
A0A8J0PFY4
LinkDB
All DBs
Position
3:130782742..130796314
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AA seq
581 aa
AA seq
DB search
MGTDSPLYSAALAPNQWVNTGLFMVPESMQTSKVSVHFSEVAVYFSEEEWQCLSKSEKDL
YQTVTMDSYYMLLSLDLLNVKPEIVQRIEQGRDPSVSCHQEMLWRKKCMGTQAGNYVGTH
HVGLPRSYWTCLDNVLYSQSGDRGLGIAYAPDAFSMPVTKTKHGHKGDRRYTCLECGKTF
IQSSHLKSHQKTHTGEKPYACNECGARFAEKSTLVKHQRTHSGEKPYVCLICDKAFSQNS
HLTMHQRTHIVKETCSECGIIVTNISPYSKIHSAQLQSECSECSQRLVAKLDALSNRIIS
KREKIYKCTQCDKRFTRSANLVVHYRTHTGEKPYICSYCGKTFTDRSNLVSHLRTHTGEK
PYSCIECGKSFPYRSALVLHKRTHTGEKPFVCNECGKSFFCNSRLVLHMKAHTGDRPFGC
NVCGKSFSCSSTLIKHQIIHTGERPYVCLECGKAFTRGSHLAIHQRTHTGEKPYSCDDCG
KGFTDKSNLASHQRTHKGVKQYECKECGRKFTQSSTLLKHQLIHTGEKPFACSECGKLFS
RSSNLIIHLRMHTGERPYSCTVCERSFAHSSHLVKHQKLHK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgactctcccctgtactctgcagctctggctccgaaccaatgggtgaacaca
ggattgtttatggttcctgaaagcatgcagacctcaaaggtttctgtacattttagtgaa
gttgcggtatatttttcggaggaagaatggcagtgtttgagcaagagtgagaaggatctc
taccagaccgtgaccatggacagttactacatgctgctatcactagatctactgaatgtc
aaaccagagattgtgcaacggattgagcaaggccgagatccttctgtttcctgtcaccag
gaaatgctttggcgaaaaaaatgtatggggacgcaggcagggaattatgtaggcacccac
catgttggtttaccaaggtcatattggacatgcctggataatgttctctattcccaatct
ggagaccgtggccttggaattgcatatgccccagatgcgttctcaatgccggtgactaaa
accaagcatggtcacaaaggagatcgacggtatacctgtttggaatgcgggaaaaccttt
attcagagttctcacctcaagtcccaccagaaaactcatacaggagagaagccgtacgcc
tgcaatgaatgtggggcccgatttgccgaaaagtcaactctcgtaaagcaccaaagaact
cactcaggagaaaagccatatgtttgccttatatgtgacaaagccttttctcagaactcc
catctaaccatgcaccagaggacccacatagtgaaagagacgtgttctgagtgtggcatc
attgtaacaaatataagcccctactccaaaatccacagtgcccagctgcaaagcgaatgc
tctgaatgtagccaacgtctcgtggcaaagcttgatgcccttagcaaccgaatcattagt
aaaagagagaaaatttataaatgtactcagtgcgataaaagatttactcgaagcgcaaac
ctggtggtccactacaggacacacacgggggagaaaccatacatctgctcctactgtggc
aaaacctttacagacaggtcgaaccttgtcagccacctgaggactcacacaggagagaag
ccttattcgtgcattgagtgtggaaaaagcttcccttaccgttcggccctggttttacac
aagagaacacatacgggagagaaaccgtttgtatgcaatgaatgcgggaagagctttttc
tgcaactcccgcttagtcctgcacatgaaagctcatacgggagacagaccctttggttgc
aatgtgtgcgggaaaagcttttcttgtagctcaacccttatcaaacatcaaattatacac
actggtgagaggccttatgtatgtctagagtgtgggaaagccttcacccgcgggtcacac
ctggcaatccaccaaaggactcacacgggggagaaaccatactcctgcgatgattgtggg
aaaggcttcactgacaagtccaaccttgcgagccatcagagaactcacaagggagtgaaa
caatatgagtgcaaggagtgcggcaggaaattcacccagagctcaacgttactcaaacac
cagctcatacacacaggggaaaaaccctttgcttgctccgaatgtggaaaactcttcagt
cgtagctccaaccttattatccacctcagaatgcatacgggagagcggccatattcttgt
acagtgtgcgaaagaagcttcgcccacagctcacatcttgtcaaacaccagaagcttcac
aaataa
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