Xenopus tropicalis (tropical clawed frog): 496825
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Entry
496825 CDS
T01011
Symbol
nol6
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
496825 (nol6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
496825 (nol6)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
496825 (nol6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
496825
NCBI-ProteinID:
NP_001011358
Xenbase:
XB-GENE-994692
UniProt:
Q5M7P5
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All DBs
Position
1:complement(211082519..211111963)
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AA seq
1145 aa
AA seq
DB search
MQKKRNRAGPPQQEAASDDGEMSDSSDKMEVAQGKGKSAVKRAPDADEVLRPVKLSKSDL
YKPPTNDELNRLKETEHLFHTNLLRMQIEELLQEVKLKEKRRKTIDGFLREINTLLGTIP
ETPQTDLTDQTWLPDSIKVPILQVPYQVKGKFCFLPPSSIKVVGSYLLGTCIKPEINVDL
AVTMPQEILQAKDNLNQRYSRKRALYLAHIASHLANNELFSSVKFTYMNSNHLKPVLLLR
PYGKDEKLVTVRIHVCPPPGFFKISRLYPNKNNVRTAWYTEQETEGVNEPPTPHYNNTIL
SDLTLEHHLHHLSNCASDFPGMKDAVALLKVWLHQRQLDKGYGCFNGFLAAMLISYLLSK
NKINKVMSGYQVLRNTLQFLATTDLTVNGITMATSTDSSLPSLHDFHEAFQVVFVDPLGV
VNLCADMTTNKYHQIQFEARESLKVLDDTSADGFHLLLMVPKPFVRTFDHVFHLTNVSKL
QGTCKKMKLLNQLIDQGGDYLATSLPYVLSILSKGLGPRVALLSHTLPHRPEWDIGEEPA
KHRDSSLLSVGLLLEAELHTSVLEKGPAADSSQALDFRAFWGEKSELRRFQDGSICEAVV
WPGSSLCEKRKVPELIVKYLLELHADIPESCISYTGNVLDCVLTRGKEAGTEEEKMVGII
QSYDDLSRKLWNLTDLPLTVTSVQGTHPCLRYSDVFPPLPVKPDWSSYQLLREKKCLVPN
PEKPCPAYVAPVKVICHMEGSGKWPQDKDAIKRVKAAFQIRLAELLRAQHQLLCNPSATH
TDVYKDGYVFRVQVAYHREPQYMKEIVTPEGMLKYQDTEESLQLELETLHLPSLTSTLHG
LHQQHPAFGGTSRMAKRWIHSQLLGDSFSEECVDLLVAHLFLHPAPYSPPSSPQVGFLRF
LHLLATFDWKNSPLIVNLNGELKGPDYTEIQNDFISARAQLPVMFIATPKDKKDSLWTKT
QPTAQILQRLIVLCLESLRALEQQLMDPSGSQDYKMTFRPPLDLYDILIRLNPKQIPRHR
EAVDQPAKSFFRGLLKEGAQVKDLMFPVVGYDPVQCYLQELREAYGEFALFFHDKHGGDV
IGVLWKPSGFEPQPFKTTNMTGRVMDGKSAKPLLVPNVEAIVEDFEILGEGLVASVEART
ERWSI
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaacggaaccgggccgggccgccccagcaggaagctgcaagtgatgacggg
gagatgtctgacagctctgacaagatggaggtggcccaaggcaaaggcaaatctgctgtc
aaaagggcccccgatgccgacgaggtgctgagacctgtgaaactgagcaaatctgactta
tacaaacctcccaccaacgatgagctgaaccgactgaaggaaactgagcatctcttccat
accaacctcttgcgtatgcagatagaggagctcttgcaggaagtgaagctgaaagagaag
aggagaaagactattgatggattcctgcgcgagatcaatactctcctgggcaccatccct
gagacgccccagacagacctcacagaccagacgtggcttcccgactccatcaaggttccc
attctgcaagtcccataccaagtaaagggcaaattctgcttcctgcccccttcctctatt
aaagtggtgggcagttacctgctgggaacctgcatcaaacccgagattaacgtggatctt
gccgtcaccatgcctcaggaaatactccaggccaaggacaatctgaaccagcgctattcg
agaaaaagggccctatacctcgcccacatcgccagtcacctcgccaataacgagctcttc
agcagtgtgaagttcacctacatgaacagtaatcatctcaagccggtcctcctgctccgg
ccctacgggaaagatgaaaagctggtgaccgttcggatccatgtctgcccccctccgggg
ttcttcaagatcagccggctgtaccccaataagaataatgtccggacggcatggtacacg
gagcaagaaaccgaaggagttaatgagcccccaacccctcactataacaacaccattttg
tctgacctgacccttgagcaccatcttcaccatctgtccaactgtgccagcgacttccct
ggcatgaaggatgccgttgctctcctcaaggtctggctacaccagcgccagcttgacaag
ggctacgggtgttttaatgggttcctggccgccatgttgatttcgtatcttctgtcgaaa
aacaagatcaataaggtgatgagtgggtaccaggtgctgcggaacacactccagttcttg
gcaaccacagacctgacggttaatgggataacaatggcaacatccacagactcttccctg
ccctctctgcatgatttccacgaggccttccaggttgtgtttgttgatcccctgggagtg
gtaaatctctgcgccgatatgaccaccaacaagtaccaccagattcagtttgaggcccgg
gagtctctgaaggttctagatgacacaagcgcggatggattccatcttctcctcatggtc
ccaaaacccttcgtacggacattcgaccacgtcttccacctcacaaatgtgtccaagctc
cagggaacctgcaagaagatgaaacttctgaatcaactgatcgatcagggcggggattac
ttggccacatcgctgccctacgtcctgtccatactgtccaaaggcctggggccgagagtg
gctctcctgtcacacacactgccgcacaggccggagtgggacattggggaagagccggca
aagcaccgggacagcagcctcctgtctgtgggactcctgctggaggcggagcttcatacc
agcgtgttggagaagggcccggccgccgatagctcccaggccttagatttccgggctttt
tggggagagaaatccgaactgcgtcggttccaggacggctctatctgcgaggcggtggtt
tggcccggcagctctctgtgtgagaaacggaaggttccagagctcattgtgaagtacctg
ctggaactacatgccgacattccggaatcctgtatcagctacactgggaacgtgctggat
tgtgtcctgaccagagggaaggaggccggcacagaggaggagaagatggtcggcattatc
cagtcctacgatgacctgagcaggaagctgtggaacctgactgatctccccctgacagtc
acctcggtgcaagggacccacccgtgcctgcgctacagcgatgtgttccctcctctgcca
gtgaaacctgattggtcgtcctaccagttactaagggaaaagaagtgtctcgtccccaac
ccagagaaaccctgcccggcctatgtagctccagtgaaagttatttgccacatggaaggg
agtgggaagtggccccaggataaagatgccattaaaagagtgaaagccgctttccagatc
cgactggcggagctcctgcgtgcccagcaccagttactgtgcaacccgagtgccacccac
actgacgtgtacaaggatggctacgtgttccgtgtacaagtggcctatcaccgggagccc
cagtacatgaaggagattgtcaccccggaggggatgctgaaatatcaggacactgaggag
tccctgcaactggagctggagacccttcacctacccagtctgaccagcaccctgcatggg
ctccaccaacagcaccctgctttcggggggacgtctcggatggccaagcgctggattcac
agccaactcttgggtgacagtttttcagaggagtgtgtggacctcctggtggcgcatctg
ttcctccacccagcaccctactctccccccagttccccccaggtgggcttcctgaggttc
ctgcaccttttggccaccttcgactggaagaacagccccctgattgtaaatctgaacggg
gaactgaagggtccggattacacagagatccagaatgactttatatccgctcgggctcag
ctccccgtcatgttcatagcgaccccaaaggacaagaaagattctctctggaccaagacc
cagcccactgcgcagatcctgcagcgcctcattgtgctgtgcctggagtcgttacgtgcc
ctggagcagcagcttatggatcccagtggaagccaagactataagatgaccttccggccg
cccctggatttgtacgatatcctgatccgcctgaaccccaaacaaatcccgcgccaccga
gaggccgtggatcagccggcaaagtccttcttccgcggtttgctaaaggagggggcgcag
gtgaaagacctgatgtttcctgttgtgggttacgatcctgtccagtgctacctgcaggag
ctcagagaagcgtatggcgagttcgccctgttctttcacgacaagcacggaggggacgtg
atcggggtgctatggaaaccttcaggctttgagcctcagccattcaaaacaaccaacatg
actggcagagtaatggatggcaagagtgccaagccgctgttggtgcccaacgtggaggcc
atcgtagaggactttgagattttgggggagggcctggtggccagtgtggaggcccggaca
gagaggtggagcatttga
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