Xenopus tropicalis (tropical clawed frog): 496852
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Entry
496852 CDS
T01011
Symbol
gata5
Name
(RefSeq) transcription factor GATA-5
KO
K17896
GATA-binding protein 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
496852 (gata5)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
496852 (gata5)
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Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
496852
NCBI-ProteinID:
NP_001011384
Xenbase:
XB-GENE-484906
UniProt:
Q5M7L8
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Position
10:complement(4876409..5029430)
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AA seq
389 aa
AA seq
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MYPSLALTANHAQPAYSHDPSNFLHSTGSPPVYVPTSRMPAMLQSLPYLQSCDTAHQGHH
LGNHPGWAQTANESHTFNASSPHTPSGFPYSHSPPVGNASAREGAYQSPLIMGSSARDQY
GNSLVRTGSYPSPYSYVGADMPPSWATGHFEGSMLHSLQGRQPLPGRRSSLEFLEEFHGE
GRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQKRLSSSRRAGLCCTN
CHTSTTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKNVSKGKTSTG
STSATNSPSSVTNSDPTPVLKTEPNIASQYPGQAIVAVSQGQSQTDDLVNGSHELKFIPE
EYAYSPTALSQSGLNVPLRQESWCALALA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccagcctggccctcactgccaaccatgcccagccggcctactcccacgacccc
tcgaacttcctgcactctacgggcagccccccggtctatgtgccgactagtcggatgccg
gccatgctacagtcgctcccctacctacagagctgcgacactgcccaccagggccaccat
ctgggcaaccacccgggctgggcacagactgccaacgagagccacacgttcaatgccagc
agcccccacacccccagcggattcccttactcgcacagcccccctgtgggcaacgccagt
gccagggaaggtgcctaccagagccccctgatcatgggcagcagtgccagggaccagtat
ggcaactccctggtgcgcaccggctcctaccccagcccctactcctatgtgggcgcggat
atgcccccttcttgggcaactggacactttgagggcagcatgttgcacagcctgcagggg
aggcagcccttaccgggtaggagatccagcctggagttcctagaagagtttcatggtgag
ggaagagaatgcgtcaactgtggggctatgtctacccctctgtggagacgagatggaacg
ggccactacctgtgcaatgcctgcgggctgtaccataaaatgaatggcatcaacagaccc
ctaatcaaaccacagaaaaggctgtcctcctcccggcgggccggcctttgctgcactaac
tgtcacaccagcaccacaaccctgtggaggcgcaactcggagggggagccggtgtgtaac
gcttgtggcctgtacatgaaactacatggggtacctcggcctctggccatgaagaaagaa
agtattcagacccggaaaaggaagccaaaaaatgtcagtaaaggaaagacttccacaggc
tcgacatcggccaccaactccccgtcttcagttacaaattccgatccgacgcccgtgtta
aaaacagaacccaatatcgcatcccagtacccgggtcaggcaattgtagcggtctcccag
gggcagagccaaacggacgatctggtcaacgggtcccacgagctgaagtttatcccagag
gaatacgcctacagccccaccgctctgagccaatcaggactgaacgttcccctacgccag
gagtcatggtgcgcgctggcactcgcctaa
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