Xenopus tropicalis (tropical clawed frog): 496866
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Entry
496866 CDS
T01011
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082
ATP-dependent chromatin remodeling
xtr03083
Polycomb repressive complex
xtr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
496866 (rbbp4)
03083 Polycomb repressive complex
496866 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
496866 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
496866 (rbbp4)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
496866 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
496866 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
496866 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
496866 (rbbp4)
PRC2.2
496866 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
496866 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
496866 (rbbp4)
Chromatin remodeling factors
NuRD complex
496866 (rbbp4)
NuRF complex
496866 (rbbp4)
NuRF complex (fruit fly)
496866 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
496866
NCBI-ProteinID:
NP_001011394
Xenbase:
XB-GENE-482002
UniProt:
Q28IL0
LinkDB
All DBs
Position
2:complement(90299793..90314902)
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGGVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaggctgcgtttgatgatgcggtggaggaacgagttataaacgaagag
tataagatatggaaaaagaacacccctttcctgtatgatctggtgatgacccatgccttg
gaatggcctagcctgactgcccagtggctcccagatgtcacaagacccgatgggaaagat
ttcagtatccacagactcgtccttgggacacacacttctgatgaacagaatcatctggtg
attgctagtgtgcagcttcctaatgatgatgctcaatttgatgcatcccactatgacagt
gaaaaaggagagtttggaggatttggctctgtcagtgggaaaatagaaattgagatcaaa
ataaatcatgagggagaagtaaacagagctcgttacatgccacagaatccatgcattatt
gctacaaaaactccatccagtgacgttcttgtgtttgattacaccaaacacccatcaaaa
ccagatccttctggtgagtgtaatccagatctccgacttagaggccaccaaaaagagggc
tatggcctatcctggaatcctaatctaagtggcaaccttcttagtgcttcagatgaccat
acaatatgcctttgggatatcagtgctgtacctaaggagggcaaagtggtggatgcaaag
accattttcacagggcacactgcagtggttgaggatgtgtcttggcatttattgcatgaa
tctctctttggatcagttgcagatgatcagaaactgatgatctgggacacccgatcaaac
aacacatcaaagcccagccactctgtggatgctcacacagctgaagtcaactgtctgtca
tttaacccttacagcgagttcatattggcaactgggtcagctgacaagactgttgcatta
tgggacctacgcaatctgaaattaaagttgcattcatttgaatctcacaaagatgaaatt
ttccaggtccagtggtccccacataatgagaccatcctggcatccagtggaactgaccgt
agactaaatgtttgggatttaagtaaaattggagaagagcagtctcctgaagatgcagaa
gatggtccccctgaacttctgtttatccatggtggtcacacagccaagatatcagacttc
tcatggaatcctaatgaaccatgggtgatctgttctgtatctgaggataatatcatgcag
gtctggcaaatggcggagaacatttacaatgatgaagatacagagggtggtgttgatcca
gagggtcaaggttcctag
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