Xenopus tropicalis (tropical clawed frog): 496900
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Entry
496900 CDS
T01011
Symbol
atg3
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136
Autophagy - other
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
496900 (atg3)
04136 Autophagy - other
496900 (atg3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
496900 (atg3)
04121 Ubiquitin system [BR:
xtr04121
]
496900 (atg3)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
496900 (atg3)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
496900 (atg3)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
496900 (atg3)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
496900 (atg3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
496900
NCBI-ProteinID:
NP_001011420
Xenbase:
XB-GENE-953266
UniProt:
Q5I0S6
LinkDB
All DBs
Position
2:complement(55455843..55477064)
Genome browser
AA seq
312 aa
AA seq
DB search
MQSVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEE
SKIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTFHHSLTGVTE
AVKEITLETQDCGKTTSNIAVDDDDDDDEGEAADMEDYEESGLLDNDDATVDTSKIKEAC
KPKADLGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRRPLTVENMYEDISQDHVK
KTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIP
TIEYDYTRHFTM
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgttattaacacggtgaagggcaaagcgctggaggtggccgagtatctgaca
cctgtactgaaggaatcaaaatttaaggagactggtgtcatcactccagaagagtttttg
gcagctggagatcatttagtccaccactgtcctacttggcaatggtcagctggtgaagaa
tcgaaaataaagccttacttaccaaatgataaacaatttttaatgacaaaaaatgtgcca
tgctacaaaagatgcaaacagatggagtattcagatgaacaagaagccattatagaagaa
gatgatggagatggaggctgggtagacacatttcatcatagtttgactggtgtcacagag
gctgtgaaagaaataacacttgagacccaggattgcggtaaaacaacaagtaatattgcc
gttgatgatgacgatgatgatgatgaaggcgaagctgctgatatggaagattatgaggaa
agtggattgttggacaatgatgatgcaacagtggacactagcaaaataaaagaagcctgc
aaaccaaaagcagaccttggaggtgaagatgccatattacagactagaacctatgacctt
tatatcacatatgacaagtattatcaaacaccaaggctttggttatttggctatgatgag
caacggcgaccattaactgtagaaaacatgtatgaagatattagtcaagaccatgtgaag
aaaactgtgacgattgagaaccatccccatcttcccccacctcctatgtgttcagttcac
ccatgcaggcatgcggaggtcatgaaaaagattattgagactgttgcagaaggcggagga
gaattgggagtacacatgtaccttcttatttttctaaaatttgtacaggctgtcatacca
accatagaatatgattacacaaggcattttactatgtaa
DBGET
integrated database retrieval system
