Xenopus tropicalis (tropical clawed frog): 496924
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Entry
496924 CDS
T01011
Symbol
42Sp50
Name
(RefSeq) uncharacterized protein LOC496924
KO
K03231
elongation factor 1-alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
496924 (42Sp50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
496924 (42Sp50)
03016 Transfer RNA biogenesis [BR:
xtr03016
]
496924 (42Sp50)
03012 Translation factors [BR:
xtr03012
]
496924 (42Sp50)
04131 Membrane trafficking [BR:
xtr04131
]
496924 (42Sp50)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
496924 (42Sp50)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
496924 (42Sp50)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
496924 (42Sp50)
Translation factors [BR:
xtr03012
]
Eukaryotic type
Elongation factors
496924 (42Sp50)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
496924 (42Sp50)
Exosome [BR:
xtr04147
]
Exosomal proteins
Proteins found in most exosomes
496924 (42Sp50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
G-alpha
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
496924
NCBI-ProteinID:
NP_001011438
Xenbase:
XB-GENE-5853280
UniProt:
Q5I0C1
A0A8J0PFV8
LinkDB
All DBs
Position
6:142067894..142073401
Genome browser
AA seq
463 aa
AA seq
DB search
MTDKTPQKTHLNVVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKGSFKFA
WILDKLKAERERGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVS
AATGEFEAGVSRNGQTREHALLAYTMGVKQMIVCVNKMDLTDPPYSHKRFDEVVRNVTVY
LKKIGYNPTTIPFVPVSGWTGENISSPSQKMGWFKGWKVKRKDGFTKGQSLLEVLDALVP
PVRPANKPLRLPLQDVYKIGGIGTVPVGKIETGILKPGMTITFAPSGFAAEVKSIEMHHE
PLQTAFPGFNVGFNVKNIAVKSLKRGNVAGNSKSDPPTEASSFTAQVIILNHPGLIKAGY
SPVIDCHTAHITCQFTELQEKIDRRTGKKLEDNPGVLKSGDAAIITLKPIKPFCVERFFD
YPPLGRFAARDLKQTVAVGVVKSVEHKAGAAARRQAQKPVLVK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaagactccccagaagactcacttaaatgttgtgattattggccatgtcgac
tctggcaaatccaccaccacggggcacctcatctacaagtgtggggggtttgatccccgg
gccctggagaaggtggaggcagctgccgctcagcttggcaagggctccttcaagtttgcg
tggatcctggacaagctgaaggcagagcgggagcgagggatcaccattgacatctccctg
tggaagtttcagaccaaccggttcaccatcaccataatcgatgccccggggcacagggac
ttcattaagaacatgattacgggcacctctcaggcagatgttgccctgctggtggtctct
gcggccacaggagaatttgaggccggtgtgtccagaaatgggcaaacgagggaacacgcg
cttctggcctacaccatgggggtcaagcaaatgatcgtctgcgtcaacaaaatggatcta
acggaccctccctacagccacaagaggtttgatgaagttgtccggaatgtgacggtctat
ctgaaaaagattgggtacaacccaacgactatcccctttgtacccgtgtccggctggacg
ggagagaatatatcttcgcccagtcaaaagatgggttggttcaaaggttggaaggtgaaa
cgaaaagatggctttactaagggtcagtccctcctggaggttctggatgccctagttcct
ccagtgcgtccagcaaataagcctctgcggctccccctgcaggatgtatacaagataggg
ggcattggaacagtccctgtgggcaagatagaaactgggattctcaagcccgggatgacc
atcacctttgccccgtccggctttgcggccgaagtgaaatccatagaaatgcaccacgag
ccgctccagacggccttcccagggttcaacgttggattcaacgtcaagaacattgcggtg
aagagtctaaagcgtggcaacgtggcgggaaactcgaagagcgacccaccgaccgaggcc
tccagcttcactgcccaggtgatcattctgaaccacccgggccttatcaaggcgggctac
tcgccggttatcgactgccacactgcgcacatcacgtgccagtttacggaacttcaggaa
aagattgaccggcggacgggtaagaaactggaggacaacccaggggtgctgaagtctgga
gatgccgccatcataaccctgaagccaatcaagcccttctgcgtggagaggttcttcgat
tatccgcctctggggaggtttgcggcgcgggacctaaaacagacggttgcggttggggtt
gtgaagtcggtggagcacaaagctggagccgcggccaggagacaagcccaaaagccggtg
ctggtgaaatga
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