Xenopus tropicalis (tropical clawed frog): 496964
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Entry
496964 CDS
T01011
Symbol
ubp1
Name
(RefSeq) upstream binding protein 1
KO
K09275
transcription factor CP2 and related proteins
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
496964 (ubp1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
496964 (ubp1)
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Gene cluster
GFIT
Motif
Pfam:
CP2
SAM_3
DUF7769
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
496964
NCBI-ProteinID:
NP_001011473
Xenbase:
XB-GENE-958759
UniProt:
Q5I078
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Position
10:complement(10256003..10270942)
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AA seq
470 aa
AA seq
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MLFWHSQPEHYWPTPAEHYQNPPSSIYRETIQLPFLKQEDQTPIVPLCPAFQCVLCAPSS
PGIKLHEETLTYLNQGQSYEIRLLSNWKGLGELAEGRRLLRSVVRVVFHDRRLQYSERQQ
LESWQLNHPGDRILDIDIPLSVGVTDPLVNPNTLNTIEFLWDPSKRTSVFIQVNCISTEF
TQRKNGGEKGAPFRIQVDTYKGDAHGGFTEHLYSCSCQVKVFKPKGADRKQKTDREKVEK
RSALEREKYQPACESTILTECIPWPDIEAPRSPPSTPSSFRMPTPERACASPVCASDSST
ESSAESLSPSSSISETQQWLVRNRFSNYCRTFSNFTGADLLKLSRKDLTQICGVADGIRL
AHSLSARSVRPRLTLYIATDTSEKKTTDDTSQTVYQELYLEEMTAAELTTKVADLFSVPA
NHIQQISRTGPHGIHILLSDMMVRHMPDESCFMATLQKMHNSDCFHCILR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttggcacagtcaaccagaacattactggcccacaccggctgagcactaccag
aaccctccaagcagtatctacagggaaaccatacaactcccattcctgaagcaagaagat
caaacacccattgtcccactgtgtccagccttccagtgcgtcctgtgtgcacccagttct
ccaggcatcaagctgcacgaagagacccttacctacctcaaccagggtcagtcttatgag
atccgcttgctgagtaattggaagggtctcggagaactcgcagagggtcgccgactgctg
aggagtgtggtcagagtggtcttccatgaccggcgcttgcagtacagcgagagacaacag
ttggagagctggcagttgaatcaccccggggatcgaatcttagatatagatattccactc
tcagtaggggtaacagacccactggtgaaccccaatactttgaacaccattgagttcctt
tgggacccaagcaaaagaacatctgtttttatccaggttaactgcatcagcactgagttc
acacagaggaaaaatggaggtgagaagggggcccctttccggattcaggtggatacatat
aagggggatgctcatggaggatttacagaacatctgtactcatgtagctgccaagttaag
gtttttaagcccaaaggcgcagatcgtaaacagaaaacagaccgtgagaaggtagaaaag
cgttcagctctagaacgtgagaagtaccagccggcatgtgagagtactatcctaactgag
tgtattccttggccagatattgaagccccccgaagccccccaagcaccccaagtagcttc
aggatgccaaccccagagagggcctgtgcctctccggtgtgtgcatcagatagttccaca
gaaagctcagccgagagtcttagtccttcatcctccatctcagagacccagcaatggctg
gtgagaaatcgcttctccaactactgccgcacattttctaattttacaggggcagacctt
ttaaagttgtctcggaaagacctcactcagatctgcggtgtggccgatgggattcgcctg
gctcattctctcagtgcaaggtctgtacgcccacgtctcacactgtacatcgccacagat
acatcagagaagaaaaccactgatgacaccagtcagacagtctatcaggagttgtatctg
gaggaaatgacggctgcagaactgaccactaaagtggccgatctcttctctgtcccagcc
aatcacatccagcagatctcaaggaccggaccacatgggatacacattctcttgagtgac
atgatggtcagacatatgccagatgaatcctgcttcatggctaccctacaaaaaatgcac
aactccgactgctttcactgcatcctgcgatga
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