Xenopus tropicalis (tropical clawed frog): 548404
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Entry
548404 CDS
T01011
Symbol
chia
Name
(RefSeq) acidic mammalian chitinase precursor
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00520
Amino sugar and nucleotide sugar metabolism
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
548404 (chia)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
548404 (chia)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Serglycin
Motif
Other DBs
NCBI-GeneID:
548404
NCBI-ProteinID:
NP_001186489
Xenbase:
XB-GENE-5868468
UniProt:
F6RI40
Q5CZZ2
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All DBs
Position
2:complement(70631779..70643034)
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AA seq
482 aa
AA seq
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MAKLILLVGLALVLNAQLGSAYELTCYFTNWAQYRPGLGKFKPDNIDPCLCTHLIYAFAG
MSNNQITTIEWNDVTLYSSFQNLKNQNGNLKTLLAIGGWNFGTAPFTAMVATAQSRQTFI
SSVIKFLRQYGFDGLDFDWEYPGSRGSPPQDKQLFTTLVQEMLAAFEAEASQSNKPRLMV
TAAVAAGISNIESGYQIPQLSQALDYIHVMTYDLHGSWEGYTGENSPLYTNPSATGYNAY
LNVDYVMNYWLNNGAPASKLIVGFPTYGHTFILSNPSNNGIGAPTSGNGPAGPYTRQAGF
WAYYEICTFLKNGATNLWSSAEDVPYAYQGSEWLGYDNEKSFQIKAEWLMKNNLGGAMVW
AIDLDDFTGTFCNQGKFPLINTLKNTLGVQASGCTPPATPVAPVTAAPATVPSGSGSGSS
GSGSSSGGSSGGSGFCAGKASGLYPVAGNTNAFWHCLNGITYQQHCQTGLVFDPSCECCN
WP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacttatcctcctcgttgggttggcgctagtgttaaatgctcagcttggctcc
gcctatgagctgacatgttacttcaccaattgggcccaatacagaccagggctaggaaag
ttcaagcctgataacattgatccatgcctttgtactcacctgatctatgcctttgccgga
atgtccaataaccagatcaccacgattgaatggaatgatgtcactctgtacagctccttc
caaaatctaaagaaccagaatggtaatttgaaaacacttctggcaattggaggttggaac
tttggaactgcaccgttcactgccatggttgccactgctcaaagccgtcagacatttata
tcttctgtgatcaaattcctgcgtcaatatggatttgatggtctagactttgattgggaa
tatccaggctccagaggcagccctcctcaggacaagcagctctttaccacattggttcag
gaaatgttagcagcttttgaagcagaagcttcacaatccaacaagcctagactaatggtg
accgctgcagtggctgctggtatctccaacatcgaatctggttaccagattccccagctt
tcacaggctctagattacatccatgttatgacttatgacctgcacggttcctgggaagga
tacactggagaaaacagccctctgtacactaacccatctgcgactggatataacgcttac
ttgaatgttgactatgtcatgaattactggctgaacaatggtgctcctgcttcaaagctc
attgttggattcccaacctatggacacacgtttatcctcagtaacccatccaacaatggc
atcggtgccccaacttctgggaatggacctgctggaccttacaccagacaagctggattc
tgggcctattatgagatctgcaccttcctgaagaatggagcaaccaacctttggtcttct
gctgaagacgtaccctatgcatatcaaggcagtgaatggttgggctatgataacgagaag
agcttccaaataaaggctgaatggctaatgaaaaataatcttggaggtgctatggtttgg
gctattgatctggatgatttcactgggactttctgtaatcagggaaagttccctctgatt
aacacactgaagaatactcttggtgttcaagcatccggctgtacccctcctgctactcct
gttgctccagtaacagctgctccagcaactgtacctagtggcagtggctctggaagcagt
ggatctggtagtagctctggtggaagctcaggtggcagtggattctgtgctggaaaagct
agtggtttgtacccagtggctggaaacaccaatgccttttggcattgcttgaacggaatt
acctaccagcagcactgccaaactggccttgtatttgatccaagctgcgagtgctgtaat
tggccatga
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