Xenopus tropicalis (tropical clawed frog): 548415
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Entry
548415 CDS
T01011
Symbol
ikzf1
Name
(RefSeq) DNA-binding protein Ikaros
KO
K09220
IKAROS family zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
548415 (ikzf1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
548415 (ikzf1)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
548415 (ikzf1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
548415 (ikzf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_REST
zf-C2H2_16
zf-C2H2_11
zf-H2C2_5
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
548415
NCBI-ProteinID:
NP_001015698
Xenbase:
XB-GENE-876522
UniProt:
Q5FWQ9
LinkDB
All DBs
Position
6:59888593..59947734
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AA seq
483 aa
AA seq
DB search
METDEAQDITQMSGNQSPAMSDGLDDPDEPMPVPEDLSTNAASQQNSKNEKSIAGNIKME
NHSDEENGRACEMNGEECAEDLRMLDSAGEKINGSLNGQGTKALTGVGGERPFQCNQCGA
SFTQKGNLLRHIKLHSGEKPFKCHMCNYACRRRDALTGHLRTHSVGKPHKCGYCGRSYKQ
RSSLEEHKERCHNYLQSMGLQSHLYAVKEESNQNDMAEDLSKIGSERSLVLDRLASNVAK
RKSCMPQKFVGEKRLSDIPYDHNANYEKENEMMQTHVMDQAINNAITYLGAESLRPLVQT
PPGGSEGVPINSMYALHKPHADITTNTSQSAHESAVENLLLLSQVKSISSEREVSPSNSC
QDSTDTESNNEERGGLIYLTNHMTPHPRNGLSTKEHRPFEMVRASSDNSQDAFKVVSGSG
ESLKVHKCEHCRVIFLDHVMYTIHMGCHGFRDPFECNMCGYQSQDRYEFSSHITRGEHRF
NMG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagatgaggcacaggatattacccaaatgtcaggaaatcagagccctgcaatg
agcgatggtttggatgacccagatgagcccatgcctgtgcctgaagatctgtctacaaat
gcagcatcacaacagaattccaagaatgagaaatcaattgctggcaatatcaaaatggag
aatcacagcgatgaagagaatggacgtgcctgtgaaatgaatggggaggaatgtgcagag
gatttacgaatgcttgattcagctggggagaaaataaatggatccctgaacggacaaggc
accaaggccttgacaggagttggaggagaacgtccattccagtgtaaccagtgtggtgcc
tcctttacccagaaaggcaatctccttcgtcatatcaaattacactctggtgaaaagccc
tttaaatgtcacatgtgtaactatgcatgcaggcgcagagatgcacttactggtcacctc
aggacacattctgtaggcaagcctcacaagtgtggatactgtggtcgtagctataagcaa
cggagctccttagaagagcataaagagagatgtcacaactacctacagagcatgggcttg
cagagccatctttatgctgtaaaagaagagagcaatcaaaatgatatggcagaagacctg
tccaagattggctccgagagatcactcgtgcttgacagacttgcaagtaacgttgccaaa
cgtaagagctgtatgcctcagaaatttgttggtgagaaacgattgtcagatattccctat
gatcataatgccaactatgagaaggaaaatgaaatgatgcagacacatgttatggaccaa
gcaattaacaatgcaatcacctacttgggagcagaatccttgcgtccactggtgcagact
ccacctggtggctctgaaggggtgcctatcaattctatgtacgctcttcataaaccccat
gcagatatcactactaataccagccagtctgcccatgaaagtgcagtggagaatctctta
ctgctttcacaggtcaaatccatctcttctgaaagagaagtttctccaagcaacagctgc
caagactcaacagatactgagagtaataatgaggaacgcggaggccttatctacctgacc
aaccacatgacccctcatcctagaaatgggctatcaacaaaagagcacaggccatttgag
atggtgagggcttctagtgacaattcacaagatgctttcaaagtggtcagtggcagtggt
gaatcactaaaagtccacaagtgtgagcattgccgtgtcatctttctagaccatgtgatg
tacaccatccacatgggctgccacggtttccgtgacccatttgagtgcaacatgtgtggt
taccagagccaggacagatatgagttttcctcacatataacccggggtgagcatcgtttc
aatatgggttag
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