Xenopus tropicalis (tropical clawed frog): 548459
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Entry
548459 CDS
T01011
Symbol
dcaf10
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
548459 (dcaf10)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
548459 (dcaf10)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
RMC1_N
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_like
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
548459
NCBI-ProteinID:
NP_001015742
Xenbase:
XB-GENE-967155
UniProt:
Q5FW06
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All DBs
Position
1:108794675..108802281
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AA seq
457 aa
AA seq
DB search
MEGGTNDGAAVPGNGAGTAGSIFWWLKNRCLGRGLCVDPARDNFRTMTSLYSSIHPADSV
NLSTRTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPVSSKHIKTLSEAHEDCVNNIRFLD
NRMFATCSDDTTIALWDLRKLNSKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWD
TNRCTEDGCPHKKFFHTRFLMRMRLTPDCSKMLISTSSGYLLILHELDLTKSLEVGSYPI
LRARRTASTSDMTSTSSDTRPSSSPCHNSDLGPLFEKHMSRSSQREGASPRNSLEVLTPE
VPGERDRGNCITSLQLHPKGWATLLRCSSNTDDQEWTCVYEFQEGAPVRQVSPRCSLRLT
HYIEEANVGRGYIKELCFSPDGRMIASPYAYGIRLLGFDSQCKELVDCLPKEAGTLQVIR
SLYSHKDVVLTTKFSPTHCQIASGCLSGRVTLYQPKF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggtaccaatgatggagctgcggtaccaggcaatggggcaggaaccgcaggg
agcatcttttggtggctgaaaaacaggtgcttgggcagaggtctttgcgtggatcctgct
cgtgataattttaggacaatgacgagtttgtatagctcgatccatcccgctgactctgta
aacttgagcactaggacccacggagctgtatttaatctggagtattcgccagatgggtca
gtgctaacagttgcatgtgaacaaacggaagtcttgctttttgatcctgtgtcttcaaaa
cacatcaaaactctttcagaggcacatgaagattgtgttaataatatcagatttcttgac
aaccgaatgtttgctacctgctctgatgacacaacgatagccctctgggatctaagaaaa
ttaaactccaaggtgtgtactctacacggccatacaagttgggtgaaaaacattgagtat
gacactaatacaaggttgctggtgacctccggatttgatggaaatgtaataatctgggac
acaaataggtgtacagaagatgggtgtccacacaagaagttttttcatactcgtttcctc
atgcgaatgaggctaactcctgattgttcaaaaatgttgatttctacttcttctgggtat
ttgctgatattacatgaattagatttaacaaaatccttggaggtgggtagctacccaatc
ttaagagcaagacggacagcttccacttcagacatgacttcaacttcttctgatacaagg
ccatccagctctccttgccataacagtgatttgggacctttgtttgaaaagcacatgtca
cgctcttcacaaagagaaggtgcttcccctcgtaacagtcttgaagttttaactccagaa
gttcctggggagagggaccgtggaaattgtattacatcacttcaacttcatcccaaagga
tgggccacgcttcttcggtgttcaagcaacactgatgatcaagagtggacctgcgtgtat
gaattccaggaaggagcccctgttcgccaagtttcaccccgatgttctttgcgattaact
cactacattgaagaagccaatgtaggtcggggttacatcaaggagctgtgtttcagtcct
gatggacgtatgattgcatcaccatatgcatatgggatccgtctactggggtttgactcc
caatgcaaagaacttgtagactgtttaccaaaagaagcagggactttgcaagtaatccgc
tcactttactctcacaaagatgttgtcttaacaacaaagttctctcccacacactgtcag
atagcatctgggtgccttagtggcagagttaccttatatcagccgaagttttag
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