Xenopus tropicalis (tropical clawed frog): 548522
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Entry
548522 CDS
T01011
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
548522 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
548522 (gspt1)
03012 Translation factors [BR:
xtr03012
]
548522 (gspt1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
548522 (gspt1)
Translation factors [BR:
xtr03012
]
Eukaryotic type
Release factors
548522 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
548522
NCBI-ProteinID:
NP_001015805
Xenbase:
XB-GENE-955565
UniProt:
Q5FVC1
A0A8J0PH13
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All DBs
Position
9:complement(34412876..34429306)
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AA seq
573 aa
AA seq
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MDASDSAPDSWEQTDMEATEAQLNSSLAQLNVNAKPFVPNVHAAEFVPSFLRDSAPSDGQ
EEEEEQQGSCPTVGMDVAEPVVENGETEMSPEESWDHKEEPIEAEPGGGSEGDGGTTEEG
ASEMMEEEEDIPKPKTIVVPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTL
EKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFV
PNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPT
VNWSNDRYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPVEACPWYIGLPFIP
YLDSLPNFNRSVDGPVRLPIVDKYKDMGTVVLGKLESGSICKGQQLTMMPNKHTVEVLSL
LSDEVETELVAPGENLKLRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSII
CPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLE
TFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagcgactcggccccagactcctgggaacagacggacatggaggccacggag
gcgcagctgaattcttccttggcccagctcaacgtgaacgccaagccgtttgtccctaat
gtacacgccgcagagttcgtgccgtccttcctgagggacagcgcgccatcggacgggcag
gaggaggaggaggagcagcagggttcctgtcctactgttggcatggatgttgctgagcct
gttgtggaaaatggagaaacagagatgtcaccagaagaatcttgggatcacaaagaagaa
cccatagaagcagaaccaggaggcggttctgagggtgatggagggactactgaagaaggt
gcctctgaaatgatggaggaagaggaggatattccaaaacctaaaacaattgttgtacct
ccagatgctccaaagaaagaacatgtaaatgtagtattcattggacatgtagatgctggt
aaatcaaccattggtgggcaaataatgtatttaacaggcatggttgacaaaaggactctt
gaaaaatatgaaagagaagccaaggagaaaaacagagaaacttggtatctgtcatgggct
ttagacacaaaccaggaagaacgagacaaaggcaaaactgtagaggttggtcgggcctat
tttgaaaccgagaaaaagcactttactatccttgatgccccaggccacaagagctttgtc
ccaaatatgatagggggagcttcacaagccgaccttgctgttttggtaatatctgcaaga
aaaggagaatttgaaacgggctttgaaaaaggaggacagacaagggaacatgccatgtta
gcaaagacagctggtgtaaaacatttaatagttctaattaataaaatggatgatccaacg
gtgaactggagcaatgacagatatgaagaatgtaaagaaaaattagtgccgtttttgaag
aaagttggtttcaaccccaaaaaagatatttacttcatgccatgttctgggcttactgga
gctaacctgaaggaaccagtggaggcgtgtccatggtacattggcttgccatttattcca
tatctggatagtttgccaaactttaatagatcagttgatggacctgtccgactgccaatt
gttgataaatacaaggatatgggaacagtggttttaggaaagctagaatctggttccatt
tgtaaaggacagcagcttaccatgatgccaaacaagcacactgttgaagttctcagcctc
ctctctgatgaagtagagacagagcttgtagcaccaggtgaaaacctaaaactcagactt
aaaggaatagaagaggaagaaatcctaccaggatttatactgtgtgacccaaacaacctt
tgtcattctggacgtacatttgatgcccagattgtgataattgagcacaaatctatcatc
tgccctggttataatgcagtgctgcatattcacacctgtattgaagaagtcgaaataaca
gccttaatctgtttggtagacaaaaaatcaggagaaaaaagtaagacgcgcccccgattt
gtaaagcaagaccaagtatgcattgcccgcttgaggacagctggaacaatttgccttgaa
acattcaaagatttcccccagatgggacgatttaccttaagagatgaaggtaagaccatt
gcaattgggaaggtcttgaaactggttccagaaaaggactaa
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