KEGG   Xenopus tropicalis (tropical clawed frog): 548523
Entry
548523            CDS       T01011                                 
Symbol
lin28a
Name
(RefSeq) protein lin-28 homolog A isoform 2
  KO
K18754  protein lin-28
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    548523 (lin28a)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     548523 (lin28a)
SSDB
Motif
Pfam: CSD Lin-28A-like_zf-CCHC_2 zf-CCHC CusF_Ec
Other DBs
NCBI-GeneID: 548523
NCBI-ProteinID: NP_001016266
Xenbase: XB-GENE-491384
UniProt: Q5EB47 B4F6Z2
LinkDB
Position
2:77455453..77472791
AA seq 195 aa
MGSVSNQEITGGLPKSLDETADIHKSDESLIFQGSGVCKWFNVRMGFGFLTMTKKEGTDL
ETPVDVFVHQSKLHMEGFRSLKEGESVEFTFKKSSKGLESTRVTGPGGAPCIGSERRPKV
KGQQKRRQKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSPNHMVAQCPAKASQAANLEE
QPISEEQELIPETME
NT seq 588 nt   +upstreamnt  +downstreamnt
atgggctctgtctccaaccaggaaatcacaggagggcttccaaaatctttggatgaaaca
gcagatatacacaaaagtgatgaatctctgatatttcaaggatctggagtatgcaagtgg
tttaatgtccgaatgggttttggattcctaactatgaccaagaaggagggaactgatctt
gagaccccagtggatgtttttgttcatcagagcaagctccacatggaaggctttcgcagc
ttaaaggaaggagaatcagtggaattcaccttcaagaaatcctccaaggggttggaatcg
actcgagtgacaggacctggtggggctccatgcattggaagtgaaaggagacccaaagta
aaagggcagcaaaagagaagacaaaagggagacaggtgctacaactgtggaggtttagac
caccatgccaaggaatgcaagcttcctcctcagcccaagaaatgccatttctgccaaagt
ccaaaccacatggttgcccagtgtccagcgaaagcctcacaggctgctaacttagaagaa
cagccaatctctgaggaacaggagctaattcctgaaactatggagtaa

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