Xenopus tropicalis (tropical clawed frog): 548553
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Entry
548553 CDS
T01011
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04115
p53 signaling pathway
xtr04120
Ubiquitin mediated proteolysis
xtr04137
Mitophagy - animal
xtr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
548553 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
548553 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
548553 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
548553 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
548553 (siah1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
548553 (siah1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
548553 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
548553
NCBI-ProteinID:
NP_001015836
Xenbase:
XB-GENE-1014415
UniProt:
A0A803KKK3
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All DBs
Position
4:74036038..74058358
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AA seq
282 aa
AA seq
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MSRQTATAIPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTEKADHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacagactgctacagcaatccctactggtacttcaaagtgtccaccgtctcag
agagttccagccctgaccgggacgactgcttcaaacaatgacttggccagcctctttgaa
tgcccagtgtgttttgactatgttttaccacctattcttcaatgtcaaagtggccatctg
gtctgcagtaattgtcgaccaaaactcacctgctgcccaacctgcagaggccctttggga
tcaattcgcaacttggctatggaaaaagttgccaactctgtgctgttcccttgcaaatat
gcctcctctggttgtgaggtaactttgccgcacactgaaaaagctgaccatgaagagctc
tgtgagtttaggccttactcctgcccctgccctggcgcttcctgtaaatggcaaggttcc
ttggatgcagtgatgccacacttaatgcatcagcataaatctataacaacgttacaagga
gaggatattgtattccttgccacagacataaaccttcctggagcagtagactgggtcatg
atgcagtcgtgttttggctttcatttcatgttagtcttggaaaaacaggagaaatacgat
gggcaccagcagttctttgcaattgtacagctcataggaacgcgcaagcaggccgagaac
tttgcttaccgactggaacttaatggtcacaggcggcgattgacttgggaagcaactcct
cgctctattcatgagggaattgcaacagcaatcatgaatagtgactgcttagtatttgac
accagtattgcacaactctttgctgaaaatggaaatttaggaataaacgtcacaatctca
atgtgctga
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