Xenopus tropicalis (tropical clawed frog): 548647
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Entry
548647 CDS
T01011
Symbol
cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03420
Nucleotide excision repair
xtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
548647 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
548647 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
548647 (cul4a)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
548647 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
548647 (cul4a)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
548647 (cul4a)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
548647 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
548647 (cul4a)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
548647 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
548647
NCBI-ProteinID:
NP_001015893
Xenbase:
XB-GENE-1014775
UniProt:
Q28FG3
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All DBs
Position
2:complement(116000538..116035283)
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AA seq
753 aa
AA seq
DB search
MAQEAQKKANFSTLAGHTNGLTKSSALTSKPSASKKLIIKNFKDKPKLPDSYTQDTWQKL
QEAVNAIESSTSIKYNLEELYQAVENLCSYKVSHTLYKQLRQVCEEHMKAQIHQFREDSL
DSFLFLKKVNRCWKDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRCHVVSDR
MVQIKTIDGILKLIEQERSGEAVDRSLLRSLLGMLSDLQVYKESFETKFLEETNCLYAAE
GQRLMQEREVPEYLHHVNRRLEEEVDRVITYLDHGTHKPLIACVEKQLLGEHLTAILQKG
LKNMLDENRDPELTLMYQLFSRVKGGQIILLQHWGEYIKNFGSGLVINPEKDKDMVQELL
DFKDNVDHIIDVCFQKNEKFVNTMKESFETFINRRANKPAELIAKYVDSKLRSGNKEATD
EELERLLDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKHECGAA
FTSKLEGMFKDMELSKDVMVQFKQHMQNHSDPGNIDLTVNILTMGYWPTYTPVDVHLPAE
MVKLQEIFKAFYLGKHSGRRLQWQSTLGHAVLKADFKEEKKELQVSLFQTLVLLLFNKGD
EFGFEEIKITTGIEDNELRRTLQSLACGKARVLNKSPKSKDVEDGDRFCFNADFKHKLYR
IKINQIQMKETVEEQVNTTERVFQDRQYQIDAAIVRIMKMRKTLTHNLLVSELYNQLKFP
VKPGDLKKRIESLIDRDYMERDKDNAKQYHYLA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggaagctcagaaaaaagcaaacttttcaacacttgctggacatacaaatggt
ctcacaaagtcctctgccttgacctctaagccttcagcttccaaaaagttaattattaaa
aattttaaagataaaccaaaactgcctgacagctacactcaggacacgtggcaaaagctc
caggaggcagtgaatgccatagaaagtagcacatctataaaatacaacctggaggagtta
taccaggctgtagaaaatttatgctcctataaagtttctcataccctttacaaacaactt
cgtcaagtatgtgaagaacatatgaaagctcaaatccatcagttcagggaagattctcta
gacagctttttatttttaaaaaaggttaacagatgttggaaggatcactgccgacaaatg
atcatgatcagaagtatttttttatttttggatcgtacttatgtccttcagaactcaatg
cttccatcaatatgggatatgggattggaactctttcgctgtcatgttgttagtgacaga
atggttcagatcaaaacaattgatggaatcttaaagcttattgagcaagaacgctctggg
gaggctgtagatcggagcttgctgagaagtttattgggcatgttgtcggacttacaagtg
tacaaagagtcatttgagacaaagttcttagaggagacaaattgtttgtatgctgctgaa
ggacaaaggctcatgcaagaaagagaggtacctgaatatctccatcatgtgaacaggcgt
ttagaagaagaggtagacagagttattacatatttggaccatgggacacataaaccactg
attgcttgtgtggaaaaacagctcttaggcgagcatttaactgctatcttgcaaaaaggt
ctgaagaatatgcttgatgaaaatagagacccagaactgactctaatgtatcaactcttt
agtcgggtcaaaggtggtcagataatactactgcagcactggggtgaatacattaaaaac
tttggaagtggattagttattaatcccgaaaaagacaaagacatggttcaggagctcctg
gatttcaaggataacgtagaccacataatagacgtttgcttccagaagaatgagaagttt
gtcaacactatgaaagaatcatttgaaacttttatcaacagaagagcaaacaagccagca
gaactcatagccaaatatgtggattccaagttacgttctggaaacaaagaagcaacagat
gaagaactggagagacttctggataaaataatgattatatttcgattcattcatggcaaa
gatgtttttgaagcattttacaaaaaagatctggctaaaagactgctggttgggaaaagt
gcctctgttgattctgagaagtcaatgctatcaaaacttaaacatgaatgtggtgctgca
tttaccagtaagctagaagggatgtttaaagatatggaactctccaaagatgtaatggtt
cagttcaagcagcatatgcaaaaccacagtgacccaggtaacatagacttgaccgtgaat
atactgacaatgggatactggccaacctatacaccagtggatgtccatttaccagcagag
atggtgaaacttcaggaaatatttaaagcattttatttaggaaaacatagtggcagaaga
ctacagtggcagtcaacacttgggcatgcagttctgaaagcagattttaaagaagagaaa
aaagaactgcaagtgtctctctttcagaccttggtgcttctcttgtttaataagggagat
gaatttggctttgaagaaattaaaatcacaactggaattgaggataatgaactgagacga
acgctgcagtcccttgcatgtggtaaagccagagttttaaataaatcaccaaagagcaaa
gatgtggaggatggagacaggttttgctttaatgccgacttcaagcacaaactatacaga
attaaaatcaaccaaatacaaatgaaagaaactgtagaagaacaagtgaatacaacagaa
agggtgttccaagaccggcagtatcagattgatgcagctattgtgcgcataatgaagatg
agaaagacccttactcataatcttttggtctctgagctttacaatcaattgaaattccct
gtaaagccaggagacttgaagaaaaggattgaatcccttatagacagagactatatggaa
agagataaagacaatgcaaaacagtaccattatctggcatga
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