Xenopus tropicalis (tropical clawed frog): 548679
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Entry
548679 CDS
T01011
Symbol
cpeb3
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 3
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04114
Oocyte meiosis
xtr04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
548679 (cpeb3)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
548679 (cpeb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
548679 (cpeb3)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
548679 (cpeb3)
Factors involved in mRNA localization
Trans-acting binding proteins
548679 (cpeb3)
mRNA cycle factors
P-body specific factors
548679 (cpeb3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
548679
NCBI-ProteinID:
NP_001015925
Xenbase:
XB-GENE-5716009
UniProt:
Q28CH2
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All DBs
Position
7:25766189..25836409
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AA seq
632 aa
AA seq
DB search
MQDDLLMDKSKAQQRQQPQQPPSSQTQQQQKEAASVAEPPSSRESSPPTHKDKMQMESPL
LPGLSFQQEPPTTPSLSPSFGSTWSTGGSNSAVDDSFFPGITPVNGTMLFQNFPHHHHVN
PVFGGTFSPQMGLAHQTQQQQRRSPASPNNHTAYTQRNAYSHQPILTNKPSSSPNSSSPS
PSNWNNQQNAAWNTPSNPWGAMQPGRDPRRAVGVGVGVGVGVPSPLNPISPLKKTFSSNV
IAPPKFSRASPLTPKSWVEDNAFRTDNGNTLLPLQDRNRPYDSFNLHTLENSLMDMIRTD
HEPLKARMGLNFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDGFLGDGHGDQSLSSGLSS
PTHCQNGERIERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGY
AFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLD
PRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIA
AISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYC
WASIHSRAGREFHKPLVKEGGDRPRHVPFHWS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgatttactgatggacaaaagcaaagctcagcagcgacagcagcctcagcag
cctccatcctcccagactcagcaacagcaaaaagaagcagcctctgtagcggagcccccc
agcagccgagagagcagcccccccacgcacaaggataagatgcagatggagtccccctta
ctgcctggcctgagctttcaacaggagccccccaccaccccctctctgtccccatctttt
ggcagcacctggtctactggaggcagtaacagcgccgttgatgacagcttcttcccaggg
attacaccagtgaatgggaccatgctgttccagaacttcccccatcatcatcatgttaac
ccagtgtttgggggaaccttctctccccagatgggcttggctcatcaaacacagcagcag
cagaggcgatcccctgccagccctaacaaccacacagcatacacccagcgcaatgcctac
agccatcagcccatcctgaccaacaagccctcatcttcccccaattcctcctcaccttcc
ccatccaactggaataaccagcaaaatgctgcctggaataccccttctaacccgtggggg
gcaatgcaacctggaagggacccacgcagggctgtaggggttggagttggagtgggtgtt
ggggtcccctctccactcaaccccatctccccactgaaaaaaactttctccagcaatgtg
atcgcaccccctaaattttcaagagcatcccctttaacccccaagtcctgggtggaagac
aacgctttcaggacagataatggcaataccctattgcccctacaggaccggaataggccc
tatgactcttttaacttgcacactttggagaattccttaatggatatgataaggactgat
catgaacctctgaaagcacgaatggggttaaattttcatcatccaggaacagataacatt
atggcacttaacaccaggagctatggtcggaggcgaggtcgatcgtcactctttcccttt
gaagatggattccttggagatggccacggagaccagtcattatcatcaggcctgagttct
ccaacgcattgtcagaacggcgaacggatagaacgttattctcggaaggtgtttgtaggg
ggcctgcctcctgacattgatgaagatgagatcacagcaagcttccgtaggtttggacca
ttggtggtggactggcctcacaaagcggaaagcaaatcttatttccccccaaaaggctat
gcctttctgctcttccaagaggaaagctctgtgcaggctctgatagacgcgtgtttagag
gaagatggcaagctttacctgtgtgtgtccagcccaaccatcaaggataaaccagttcaa
attcgaccctggaacttgagtgacagtgactttgtgatggatggttctcagccgctagac
ccaaggaaaactatatttgtaggtggtgttccacggcccttacgagctgttgagctggca
atgataatggatcgcttatacggaggcgtgtgctatgctggcatcgacacagacccagaa
ctgaaataccccaagggcgctggcagagtggcattctccaatcagcagagctacatcgct
gctatcagtgctcgctttgtccaactccagcacaatgacatagacaagcgggtggaagtg
aagccatatgtgctggatgatcagatgtgcgatgaatgccagggcacgcgctgtggtgga
aagtttgctccgtttttctgtgccaatgtgacctgcctgcagtattactgtgagtactgc
tgggccagcatccactcccgggctggcagggaattccacaaaccactggtgaaagaggga
ggagatcgcccgcgccacgtccctttccactggagctga
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