Xenopus tropicalis (tropical clawed frog): 548685
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Entry
548685 CDS
T01011
Symbol
slc16a1
Name
(RefSeq) monocarboxylate transporter 1
KO
K08179
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
548685 (slc16a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
548685 (slc16a1)
04147 Exosome [BR:
xtr04147
]
548685 (slc16a1)
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC16: Monocarboxylate transporter
548685 (slc16a1)
Major facilitator superfamily (MFS)
Organic acid transporters
Monocarboxylate transporter (MCT) family [TC:
2.A.1.13
]
548685 (slc16a1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of microglial cells
548685 (slc16a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Motif
Other DBs
NCBI-GeneID:
548685
NCBI-ProteinID:
NP_001015931
Xenbase:
XB-GENE-1014566
UniProt:
Q28CH7
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All DBs
Position
2:60998664..61016014
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AA seq
490 aa
AA seq
DB search
MAPAVGGPVGYTPPEGGWGWVVVVAAFVSIGFSYAFPKSITVFFKDIEAIFGATSSEVSW
ISSIMLAVMYAGGPISSVLVNKYGSRPVMIAGGCLAGTGLIAASFCNTVAELYLCIGVVG
GFGLAFNLNPALTMIGKYFFKKRPIANGLAMAGSPVFLSTLAPLNQYFYSIFGWRGSFLI
LGGLLFNCCVAGSLMRPIGPKPEDTKKKVTKEVLEEAGKCVSKEDGDAHKDLIEGKAKTK
PTLFQTINKFLDLSLFTHRGFLLYLSGHMIMFFGLFAPLVFLSNYAKSKNISPESAAFLL
SILAIVDMIARPSMGIVANTKWVRPKIQYFFAVAVLYNGICHLLVPLSTSYVGFCIYAGF
FGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGRLNDIYGDYKYT
YQACGIVLIVASVYLFIGMTIHYRLLAKEQKAEQKKAQEANAGASENKVNELSVLPQNSD
DVLKEDESHI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgctgttggaggcccagtgggatacactcccccagaagggggctggggctgg
gtagtagttgtagcagcctttgtgtcgattggattctcatatgccttccccaaatcaatt
acagtctttttcaaagacatagaggcaatctttggagcaacaagtagcgaggtatcctgg
atttcttctataatgctggctgtaatgtatgctggaggtccaataagcagtgtcttggtg
aacaagtatggaagtcgtcctgttatgattgctggtggttgccttgctgggactggatta
atagctgcttcattttgtaacactgtcgctgagctgtacctttgtattggtgttgttgga
ggttttggtcttgcattcaacttaaacccagctttgacaatgattggtaaatatttcttt
aagaaaagacccatagcaaatggattggctatggcaggaagtcctgtatttttgtccact
ttagctcctctgaatcagtacttctacagtatttttgggtggagaggaagcttcctgatt
ttgggtggtcttctgtttaactgctgtgttgctgggtctttgatgcgtcccataggacca
aagccagaagatacaaaaaagaaagtgacaaaagaagtgttggaagaggctggaaagtgt
gtttctaaagaagatggggatgcccataaagaccttatagagggcaaggcaaaaactaag
ccaacactgttccagaccataaataagttcctagacctttctctcttcactcatcgtgga
tttcttctctacctgtcggggcacatgattatgttttttggactgtttgctcctttagtc
tttcttagcaactatgcaaaaagcaagaacatttcacctgagtctgctgcatttctgctt
tcaattcttgcaattgtagatatgattgcaaggccctccatgggaattgtggcaaacacc
aaatgggtgagacctaaaattcaatatttctttgctgttgcagttttgtacaatggaata
tgccaccttctggttcccctttcaacatcttatgtaggcttttgtatttatgctggtttc
tttggttttgcttttggttggcttagctctgtcctctttgaaacacttatggacttggtt
ggagcccagagattctcaagtgctgttggattagtcacgattgtggaatgctgtcctgtg
cttctaggaccaccactgttaggaaggttgaatgatatatatggagactacaaatacacc
tatcaagcttgtggaatagttctaattgttgcttcagtctacctcttcattgggatgaca
atccactacagactattggcaaaggaacaaaaagcagagcagaaaaaagcacaggaagca
aatgcaggggcatcggagaacaaagtgaatgaactctctgtccttcctcaaaattctgat
gatgttttgaaagaagatgaaagtcacatatga
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