Xenopus tropicalis (tropical clawed frog): 548691
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Entry
548691 CDS
T01011
Symbol
rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03320
PPAR signaling pathway
xtr04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
548691 (rxrb)
03320 PPAR signaling pathway
548691 (rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
548691 (rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
548691 (rxrb)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
548691 (rxrb)
Nuclear receptors [BR:
xtr03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
548691 (rxrb)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
548691
NCBI-ProteinID:
NP_001015937
Xenbase:
XB-GENE-480167
UniProt:
Q28CI3
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Position
8:72285527..72298218
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AA seq
449 aa
AA seq
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MGDSRVCQSPDTSSLSPPLGRSYSDTPPPPSAPLHPSMVGSAMTSSVNSPLGSIGSPFQV
INCSVGSPGIPGTPSIGYGPVSSPQINSTVNLSGLHPVSSSEDVKPPLGMRSMSSHPNGG
AVSGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCIVDKRQRNRC
QYCRYQKCLATGMKREAVQEERQRGKERDGEAEFSGAINEEMPVEKILEAELAVEQKSDQ
SLEGGGSPSDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAI
ILFNPDAKGLSNPGDVEVLREKVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIGLKCL
EHLFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtcgggtatgccagagcccggacacatcatctctcagcccccccttagga
cgttcctatagtgacaccccaccacccccctctgcccctttacatccttccatggttgga
tctgcaatgacctcatctgtcaactccccacttggtagcattgggtctccttttcaggtt
attaattgttctgttggatcccctggcattcctggaactccatcaattggttatggacct
gtcagtagcccccagattaattccactgtgaatctatctggcctacaccctgttagctcc
tctgaggatgtgaagcctccactagggatgaggagtatgtcaagtcatcccaatggaggg
gcagttagtggaaagaggctgtgtgcaatctgtggggaccgctcttcaggaaagcactat
ggagtgtacagctgtgagggatgtaaaggattcttcaaacgtacaattcggaaggacctg
acctacacatgtagagacaacaaagattgtattgtagataagaggcaaagaaatagatgt
cagtattgcagatatcagaaatgccttgctactgggatgaagagagaagcggtacaagag
gagcgtcagcggggaaaggaacgtgatggagaagcagagttcagtggggcaataaatgag
gagatgcctgtggagaaaatattggaagcagaactggcagtagaacagaaaagtgaccag
agccttgagggaggcggatcacccagtgatccagtcactaatatatgccaggctgctgac
aaacagctctttactcttgttgaatgggccaagaggatccctcacttctccgagctgcct
ttggatgatcaggtcattctgctaagagctggatggaatgagctccttatagcttctttt
tctcatcgctcaatctctgtaaaagatgggattttacttgccactggtcttcatgttcac
aggaatagtgcacacagtgcaggcgtgggggccatatttgacagggtcctaactgagttg
gtatcaaagatgagagacatgcgcatggacaagacagaactgggctgtctcagagcaatc
atattgtttaacccagatgccaagggtttatcaaacccaggggatgtggaagttttgcgg
gagaaagtatatgcttctttggaatcctactgtaaacaaaaatatccagatcagcaggga
aggtttgccaagttacttctgcgtctgccagctctgcgatccattggtctgaaatgtctt
gaacatctattcttttttaaacttattggagacactccaatagacacatttctgatggag
atgttagaggcacctcaccagctatcttga
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