Xenopus tropicalis (tropical clawed frog): 548708
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Entry
548708 CDS
T01011
Symbol
pex7
Name
(RefSeq) peroxisomal biogenesis factor 7
KO
K13341
peroxin-7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
548708 (pex7)
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Gene cluster
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Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
MIOS_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
eIF2A
Beta-prop_SPT8
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_DCAF12
Rav1p_C
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
548708
NCBI-ProteinID:
NP_001015954
Xenbase:
XB-GENE-1015698
UniProt:
Q28E40
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Position
5:complement(58426121..58624941)
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AA seq
322 aa
AA seq
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MAVSGDGRLHAVRIPDRHGYAVEFSPYKPSTLACATSQNYGISGCGTLVVLEQSEGGIAV
RRSFDWTDALFDVTWSEISENIVVTSSGDGSLQLWDITKPQGPLQVFKEHTQEVYSVDWS
QTRGEQLIVSGSWDHTVKLWDPSFGKPLCTFTGHENIIYSTIWSPHIPGCFASASGDQSL
RIWDMKTPVSKVVIPAHQAEILSCDWCKYDQNLLVTGAVDCSLKGWDLRTVRQPVFELRG
HNYAIRRVKFSPFHANIVASCSYDFTVRLWDFSKSSSLLETVNHHTEFVCGLDFSILTPG
QIADCAWDETVKIYFPSCLSLP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctcgggagatggaagactccatgcagtccgcattcccgacaggcatggttat
gcggtggagttctcgccttacaaaccctccactttggcatgcgctacctcacaaaactat
ggcatatcaggttgtgggactctggtggtgctagagcaaagtgaaggtggaattgctgtt
cgtagaagctttgattggactgatgcactgtttgatgtaacatggagtgagatcagtgag
aacattgtggtgacttccagtggagatggatctctgcaactgtgggatatcactaaaccc
caaggtccattacaagtcttcaaagaacacacacaagaggtttacagtgtcgattggagc
caaacaagaggcgaacaattgatagtgtctggctcttgggatcatactgttaaactgtgg
gatccctcctttgggaagccgctatgcacattcactggtcatgaaaatattatctatagc
accatatggtcaccacatataccaggctgctttgcatctgcctcaggtgaccagagtctc
agaatttgggatatgaaaacacctgtgtccaaagtagtaattccggcccatcaggcagag
attttaagctgtgactggtgtaaatatgaccagaatttgcttgtgactggtgctgttgac
tgcagtttaaaaggatgggacttgaggactgtacgtcagcctgtgtttgaacttcgaggc
cataattatgcaattagaagagtaaaattttctccatttcacgcaaatattgtggcatct
tgttcctatgactttacggtgaggttgtgggacttttccaaatcttcctcattactagaa
acagtgaaccatcacacggaatttgtttgcggccttgacttcagcatcctcacacctgga
cagattgcagactgtgcgtgggatgaaactgtgaaaatatatttcccatcctgcctctca
ctaccttag
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