Xenopus tropicalis (tropical clawed frog): 548725
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Entry
548725 CDS
T01011
Symbol
hoxb3
Name
(RefSeq) homeobox protein Hox-B3
KO
K09303
homeobox protein HoxA/B/D3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
548725 (hoxb3)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
548725 (hoxb3)
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Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
548725
NCBI-ProteinID:
NP_001015971
Xenbase:
XB-GENE-482576
UniProt:
Q28E82
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All DBs
Position
10:complement(12024784..12074446)
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AA seq
386 aa
AA seq
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MQKASYYDNPTLFGGYPYQAGSLGYEGPQQSFPTSSHMDNEFQRSSCSLQSLGHSGPLVK
AKNLNGSCMRPNLSSEQSQPLSPTANPSSNTNSSSSQASLSKPSPAKSQASGSPASKQIF
PWMKESRQNSKQKSSPPAPAAESCGGDRSPPGSSASKRARTAYTSAQLVELEKEFHFNRY
LCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKVKGMSSSSGGASPTSTPPLSMQSS
AGFLGSMHSMTANYEAPSPPPFNKSHQNAYYQNPGKGCPSQQKYGNTAAEYDHHGLQGNG
GAYVSPNMQGSPVYVGGNYVDSVPAQGPPLYGLNHLAHQPTNMDYNGAPPMPASQHHAPC
DPHPTYTELSAHHQGRIQEAPKLTHL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcatcctactatgacaaccccactctgttcggaggttacccctaccaggca
gggagtctgggctatgaaggcccccagcagtccttccccacttcttcccatatggacaat
gaattccagcgctcctcctgctccctgcagtctctggggcacagcggccctctggtcaaa
gctaagaacctaaatgggagctgtatgcgccccaacctgtcctctgagcagtcccagccc
ctgtctccaacggccaaccccagtagcaacaccaacagcagcagctcccaggcttccctc
agcaagccctctccagccaaaagccaggccagcggcagcccagccagcaagcagatcttc
ccttggatgaaagagtccagacagaactccaaacagaaatccagcccccccgccccagcg
gcagaaagctgcggcggtgacaggagccccccgggttcgtctgcgtccaagagagcgcgt
acggcctacaccagcgcccaactggtcgaactggagaaggagtttcacttcaaccgctac
ctgtgccggccccgccgggtggaaatggccaatctgctcaacctgagcgagaggcaaatc
aagatctggttccagaaccggaggatgaagtataagaaagatcaaaaggtaaaaggcatg
tcttcttcatcaggaggagcttcaccgactagcacaccgcccctgagcatgcagtcgtct
gcagggttcctgggatccatgcactctatgactgcgaattatgaggcgccctccccgccc
ccgtttaataagtcccaccagaatgcctactatcagaaccctggcaaaggttgcccctct
cagcagaagtatgggaacactgctgcagagtacgaccaccatggcttacaagggaatggg
ggcgcctatgtgtcccccaatatgcaaggaagtccggtgtacgtagggggtaactatgtg
gattctgtgccagcacaaggcccgcctctttatggtctcaaccaccttgcacaccagccc
accaatatggactacaatggggctcctcccatgccagccagccagcaccatgcaccttgt
gacccccacccaacctacacagagctctcagcccaccaccagggcaggatccaggaagcc
cccaaattgacccatttgtga
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