Xenopus tropicalis (tropical clawed frog): 548736
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Entry
548736 CDS
T01011
Symbol
vps37a
Name
(RefSeq) vacuolar protein sorting-associated protein 37A
KO
K12185
ESCRT-I complex subunit VPS37
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
548736 (vps37a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
548736 (vps37a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
548736 (vps37a)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
548736 (vps37a)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
548736 (vps37a)
Exosomal proteins of colorectal cancer cells
548736 (vps37a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mod_r
UEV
UQ_con
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
548736
NCBI-ProteinID:
NP_001015982
Xenbase:
XB-GENE-969334
UniProt:
A0A8J0PGM6
Q28EA9
LinkDB
All DBs
Position
1:42302834..42320530
Genome browser
AA seq
382 aa
AA seq
DB search
MSWLFPSSKSPRPLQQLTSLQQQKQRQIESLKACHNSIAEIQKDVEYRLPFTVKNLTINI
NILLPPQFPQEKPHISVFPPIHHHLVDKQGMNVICPLVNNFTMHSDLGKIVQTLLEEFWK
NPPTLAPSSGSFPYLFSNPTGPPLYPHPGFPYLPPYPAQESSRSVPVSETVPPAYNSAKA
AAPTYGLITDLPLPVPTSEVGINGFTYKMPDLPETFPELLELSVSQLSEMSDQEDVLLEQ
FVNLPQLKQVISDKEELVRNIEEMAKRNLQMEPVLEVKRQAILDKYEQLMQLKLSFEKKL
QRQHELSESCSLSALQARLKVAAHEAEEESDKIADEFLEGKIEIDEFLVNFMDKRTCCHS
RRAKEEKLQQAISLHSQYHAPL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagttggctcttcccctcgtctaagagccccagaccacttcagcaacttacaagcttg
cagcagcagaaacagaggcagattgagtcccttaaagcttgccacaacagtattgcagaa
attcagaaagatgtggaatacaggctgccttttacagttaaaaaccttaccatcaacata
aacattttgcttcctccgcagtttcctcaagaaaaacctcacatcagtgttttcccacct
attcaccatcacctagtggataagcaaggcatgaatgtcatctgtccccttgttaataat
tttacaatgcactctgatcttggtaaaatagttcagactttactggaagagttttggaaa
aatccccccacactggcccccagttctggctcctttccttatttgttcagcaatcctact
ggaccacctctgtaccctcatccggggtttccatatcttccaccatacccagcgcaagaa
tccagtagatccgttccagtttcagaaactgttcctccagcctacaactctgccaaagct
gctgctcctacctatgggttaatcacagatcttcccctaccagtccctacttctgaagtg
ggtatcaatggcttcacctacaagatgcctgatctccctgaaacttttcctgaactctta
gaactcagtgtatctcagctctctgaaatgtcagatcaagaggatgttctgttggagcag
tttgtgaatcttccgcagttgaagcaggtcatttctgataaagaggagttggtgcggaac
attgaggagatggcgaaaaggaatcttcagatggagccagttctggaagtaaaacgacaa
gcaatacttgacaaatatgagcagctgatgcagctgaagttgtcgtttgagaagaagttg
caaagacaacatgagttaagtgagagctgcagtctgagtgctttgcaggcaaggttaaag
gttgcagcacatgaagccgaggaggagtctgacaagattgcagatgaattccttgaggga
aaaatagaaattgatgaattccttgttaacttcatggacaaaagaacgtgttgccacagt
agaagagccaaagaagaaaagcttcagcaagcaatatcactgcacagccaataccatgca
ccgttatag
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