Xenopus tropicalis (tropical clawed frog): 548749
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Entry
548749 CDS
T01011
Symbol
bmi1
Name
(RefSeq) polycomb complex protein BMI-1
KO
K11459
polycomb group RING finger protein 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
548749 (bmi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
548749 (bmi1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
548749 (bmi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-Nse
zf-ANAPC11
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
548749
NCBI-ProteinID:
NP_001015995
Xenbase:
XB-GENE-942188
UniProt:
F6WZ16
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All DBs
Position
6:complement(26835765..26846744)
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AA seq
325 aa
AA seq
DB search
MHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQV
HKTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRRDFYAAHPSADASNGSNEDRGEVADE
DKRIITDDEIISLSIEFFDQNRADRKGSKDKEKSKEEANDKRYLRCPAALTVMHLRKFLR
SKMDIPSNFQIDVMYEEEPLKDYYTLMDIAYIYTWRRNGPLPLKYRVRPTCKRMKINPHT
DRITNTSGDMESDSGSDKAGSLGGGMPSTSSCMPSPSTPVQSPHPQFPHISSTMNGTSSS
SSHQNPFANRARKISLNGASAISSG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggaccaccaggattaaaattaccgagttaaacccacacctcatgtgtgtgctg
tgtggcggatacttcatagatgctacaaccataatcgaatgtctccattccttttgtaaa
acctgcatcgttcggtatctggagaccagcaaatactgtccgatctgtgatgttcaagta
cataaaaccaggccccttctcaacatcagggcagacaaaacccttcaggatattgtgtat
aagttggtgccagggcttttcaaaggtgaaatgaagaggagaagagacttttatgctgct
catccttctgcagatgcttccaatggctccaacgaggatagaggagaggtcgcagacgag
gacaagaggatcattacggacgatgagatcattagcttgtccatcgagttctttgaccaa
aacagggctgatcggaagggaagcaaagacaaagagaaatccaaggaagaggccaatgac
aagcgctacctgcgctgcccagccgccctcacagtcatgcatctaaggaagttcctgaga
agtaagatggacatccccagcaatttccagatcgatgtgatgtacgaggaggaaccgctg
aaggactattacaccttaatggatattgcttatatctacacctggagaaggaacgggccc
cttccgttgaagtacagagtaagaccgacctgtaaaaggatgaagataaacccacacacc
gacaggataaccaacactagcggggacatggaaagtgactctggcagcgacaaagcgggc
agcctgggtggcggcatgccttccacctcctcctgtatgccaagccccagcacccctgtg
cagtccccgcacccacagttcccccacatctccagcaccatgaatggaaccagctccagc
agcagccaccagaaccccttcgccaacagagcaaggaaaatatccttaaacggagcctct
gccatctcttcgggatga
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