Xenopus tropicalis (tropical clawed frog): 548783
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Entry
548783 CDS
T01011
Symbol
kalrn
Name
(RefSeq) kalirin RhoGEF kinase
KO
K20690
Rho guanine nucleotide exchange factor 25
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
548783 (kalrn)
Membrane trafficking [BR:
xtr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
548783 (kalrn)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_KALRN
SOS1_NGEF_PH
SH3-RhoG_link
PH
PH_19
PH_10
IQ_SEC7_PH
PH_13
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
548783
NCBI-ProteinID:
NP_001016029
Xenbase:
XB-GENE-1014006
UniProt:
B7ZTI2
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All DBs
Position
9:complement(88151758..88224007)
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AA seq
662 aa
AA seq
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MKGGTAKYPSGSCLGWLCTRCCCCFFATDSFSVSAAENGGKSESVANLQPQASLNSIHSS
PGPKRSTNTLKKWLTSPVRRLNSGKGESNIKKQKKRDGRNLGSPRAGDETTPQGDSADEK
GKKGWDEEADDESHTPLPPPMKIFDNDPTPDDKTIDGGSYRGAQNINEGFVNEGLAPSPA
PRNHEEEQKAKALRGRMFVLNELVQTEKDYVRDLGFMVETYIPKMEERGTPEDMNGKDKI
VFGNIHQIYDWHKDFYLAELEKCLLEPERLAQLFIKHERRLHMYVVYCQNKPRSEFVVAE
YDAYFEDLMQEVNPRFTVSDFLIKPIQRITKYQLLLKDFLKYSQKAGLECSEIEKAVELM
CLVPKRCNDMMNLGRLQGFEGKLTAQGKLLQQDTFYVIEQESGVQSRTKERRVFLFEQIV
IFSELLRKGSSTPGYMFKRGIKMNYLILEENIDNDPCKFAIRSRETSERVILQAANADIK
QAWVQDIGQVLETQRDFLNALQSPIEYQRKESNAAMNKPQIGRGPSPTVRPLSSTPVGCE
KDVTIPVRNQSLPARKIPTSNGSAGYEMYPRAEKCDPNQSELSGCNGTNSMVVVQDYYAL
KENEICVYHGELVQILAINQQNMFLVFRPSNDHSPAAEGWIPGSVLGHISKPSAENSDRS
IK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggcactgccaagtacccctcgggctcctgcctggggtggctctgtacccgc
tgctgctgctgcttctttgcaacagattcattttctgtctccgcggcggaaaatgggggg
aagtccgagtcggtggccaatctgcagccccaggcgtccctgaattctatccacagctcc
ccgggccccaaacgctccaccaacaccctaaaaaagtggctgacgagccctgtgaggcga
ctgaacagcgggaagggcgagagcaacatcaagaagcaaaagaaaagagacgggcgcaac
ctcggctcccccagagctggggacgagaccaccccacagggagacagcgccgatgagaag
ggcaagaaggggtgggacgaagaggctgacgacgaatcccacactccgcttcctccgcca
atgaagatctttgataatgaccccactccggacgacaagaccattgacggaggttcttat
cggggcgcacagaacataaatgaaggatttgtgaatgagggtttggccccctcgccagct
cccaggaaccacgaagaggagcaaaaagccaaagcactcaggggcaggatgtttgtactg
aatgagctggtacagacggagaaggactatgtccgggatcttgggtttatggtagagacg
tacatccccaagatggaggagagggggaccccggaagatatgaacggaaaagacaagatc
gtattcggcaacatccaccagatctacgattggcacaaagacttttacttggcagaacta
gagaaatgcctattggagccggagaggttggcgcagttatttataaaacatgagaggcgg
ctgcacatgtatgtggtttattgccaaaacaaaccgcgctcggagtttgtcgttgccgaa
tatgacgcctactttgaggatctcatgcaggaggtgaatcccagatttactgtcagtgat
tttctcatcaaaccgatccaaaggataactaagtaccaactgctgctaaaggacttcctt
aagtacagtcagaaggcgggtttggagtgttcagaaatcgagaaagccgtggaactaatg
tgccttgtcccgaaacgctgcaacgacatgatgaacctggggcgcctgcagggattcgag
gggaagctgacagcccaggggaagctgttgcagcaggacaccttctatgtgatcgagcag
gaatcgggggtccagtctcggacgaaggaaaggcgggttttcctgttcgagcagattgtt
attttcagcgagctcctgcggaaaggttcctccacgccggggtacatgttcaaaaggggc
ataaagatgaattatctcatcttagaagagaacattgacaacgacccgtgcaaattcgcc
attcggagccgcgagacgtcggagcgggtgatcctgcaagcggccaacgccgacattaaa
caggcctgggtgcaggacatcgggcaagtgctggagacccagagggacttcctaaacgcc
ctgcaatcgccaatagaataccagcggaaggagagcaacgcagccatgaacaagcctcag
attggccgcgggccgtcccccaccgttaggcctctctcctctacgcccgtagggtgtgaa
aaagatgtcaccatcccagtgcggaaccagtcgctaccagcgcggaaaatacctacctct
aacggcagcgccgggtatgaaatgtacccacgggcggagaaatgtgacccaaaccagagc
gagctgagcggctgcaatgggaccaactccatggtggttgtacaggattactatgcacta
aaggagaatgagatctgcgtgtaccacggggagttggtacagattctggccatcaatcag
cagaacatgttcctggtattccggccgtccaatgaccattccccggcagcggaaggctgg
atcccgggatcagttttgggccacatttctaaaccttccgcagaaaatagcgacagatcc
atcaagtaa
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