Xenopus tropicalis (tropical clawed frog): 548832
Help
Entry
548832 CDS
T01011
Symbol
vps25
Name
(RefSeq) vacuolar protein-sorting-associated protein 25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
548832 (vps25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
548832 (vps25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
548832 (vps25)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
548832 (vps25)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
548832 (vps25)
Exosomal proteins of colorectal cancer cells
548832 (vps25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ESCRT-II
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
548832
NCBI-ProteinID:
NP_001016078
Xenbase:
XB-GENE-976399
UniProt:
F6T240
LinkDB
All DBs
Position
10:complement(21931671..21941982)
Genome browser
AA seq
174 aa
AA seq
DB search
MGFEWPWQYNFPPFFTLQPNVDTRQKQLSAWSSLVLSYCRHNKLYTMNLMEIQESPLFNN
KKIQRKLSLESVQVVLEELKKKGNLEWIDKNKSRFLIMWRRPDEWGKVIYQWVSKNGMTN
SVFTLYELISGDDTEGEEFHGLDEAMLLRSLEALQQEHKAEIILLNDSRGVKFF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgagtggccgtggcagtacaatttcccccctttcttcacattgcagcccaat
gtggatactaggcaaaagcaactgtcagcatggagctcattggtcttgtcttactgccgg
cacaacaagttgtacaccatgaatttaatggaaatccaagagagcccgttattcaacaac
aagaagatacagcgaaagctgtctttggaatctgtccaggtggttttagaggaactcaag
aaaaaagggaatctggagtggatagataagaacaaatctaggttcctgatcatgtggagg
agaccagatgaatggggcaaagtcatttaccaatgggtctccaagaatggaatgaccaat
tctgtcttcactctttatgagttgatcagtggcgatgacacagagggagaagaattccat
ggtctggatgaggccatgttactcagatccttggaagcactgcagcaagaacacaaggct
gaaatcatcttgctaaatgacagcagaggcgtgaaattcttttaa
DBGET
integrated database retrieval system
