Xenopus tropicalis (tropical clawed frog): 548835
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Entry
548835 CDS
T01011
Symbol
snx5
Name
(RefSeq) sorting nexin 5
KO
K17920
sorting nexin-5/6/32
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
548835 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
548835 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
548835 (snx5)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Macropinocytosis
Sorting nexins
548835 (snx5)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
548835 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
BLYB
Motif
Other DBs
NCBI-GeneID:
548835
NCBI-ProteinID:
NP_001016081
Xenbase:
XB-GENE-947018
UniProt:
Q28F22
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Position
5:complement(37823252..37856501)
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AA seq
400 aa
AA seq
DB search
MAAPGIEESGSSKLRSVSVDLNSDPSLQIDIPDALSERDKVKFTVHTKTKLPNFKSPDFS
VTRLHEDFIWLHDSLIETEDYAGLIIPPAPAKPDFDGPREKMQKLGEGEGSMTKDEFSKM
KQELEAEYLAVFKKTVAVHEVFLQRIASHPILCKDTNFHIFLEYDQDLSVRRKNTKEMFG
VFFKSMVKSADEVLFSGVKEVDEFFDQEKTFLVNYYNRIKDSCAKADRMTRTHKNVADDY
IHISAALTCVAEEENTQVRKYLLKLAELFEKLRKVEARVASDQDLKLSELLRYYMLNIEA
AKDLLHRRTKSLGDFQNSNKALDKARLKSKDVKPAEQHQHECCQKFEKLSESAKQELVGF
NRRRVAAFRKNLVEMTELEIKHAKNNVSLLQSCIDLFRNS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccagggattgaggagagcggcagcagtaagcttagatcggtgtctgtggat
ctaaacagtgatccttctctgcagattgatattccagatgcactcagtgagagagacaaa
gtcaagtttactgtgcataccaagaccaaactgcccaattttaagagccctgatttttct
gtaacacgcttacatgaagattttatctggctacacgactctctcattgagactgaagac
tatgcaggattgattattcccccagccccagcaaaacctgattttgatgggccccgagaa
aaaatgcagaaattgggagagggcgaaggttccatgactaaggatgaattttccaaaatg
aaacaggaattggaagctgagtatttggcagtatttaagaagactgtggcagtgcatgaa
gttttcctgcagaggatagcatcgcaccctattttatgcaaagacaccaacttccacata
ttcctagaatatgaccaagatttaagtgtaaggaggaagaatacaaaagaaatgtttgga
gtcttctttaagagcatggtaaaaagtgcagatgaggttttgttttctggagtaaaggaa
gttgacgagttctttgatcaagaaaaaaccttcctggtaaactactacaacaggatcaag
gactcgtgtgcaaaagctgacagaatgacaagaactcacaaaaatgtcgcagatgattat
attcatatttcggctgccctaacatgtgtagctgaagaggagaacactcaagttagaaag
tacttgctaaaattggccgagttgtttgaaaagcttcggaaagtagaagccagagttgca
tcagatcaggacctaaaactttcagagcttttaagatactacatgcttaacattgaagca
gcaaaggacctcttacacagacgtacaaaaagcctgggcgattttcagaattccaataaa
gcccttgacaaagctaggctgaaaagcaaagatgtgaaaccagcagagcagcatcagcac
gagtgttgccagaagtttgaaaagctctcggagtctgcaaaacaagagttggttggcttc
aaccggagaagagtagctgcttttcgcaaaaaccttgtcgaaatgacagaactagagatc
aaacatgcaaagaacaacgtctccctgttacaaagctgcattgacctgtttaggaacagt
taa
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