Xenopus tropicalis (tropical clawed frog): 548848
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Entry
548848 CDS
T01011
Symbol
42Sp43
Name
(RefSeq) P43 5S RNA-binding protein
KO
K09191
general transcription factor IIIA
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
548848 (42Sp43)
03021 Transcription machinery [BR:
xtr03021
]
548848 (42Sp43)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
548848 (42Sp43)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
548848 (42Sp43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
TFIIIA_zf-C2H2
zf-H2C2_2
zf-met
zf-C2H2_6
zf-C2H2_jaz
Zap1_zf1
zf_ZIC
Motif
Other DBs
NCBI-GeneID:
548848
NCBI-ProteinID:
NP_001016094
Xenbase:
XB-GENE-5898342
UniProt:
Q28F41
LinkDB
All DBs
Position
10:complement(10355693..10363893)
Genome browser
AA seq
365 aa
AA seq
DB search
MKNVGQTIPGKLQAFRCPAAGCMATYRKEGKLRDHMAGHSGQKPWKCSKKDCGKVFARKR
QIQKHIKCHLILKKYSCSAAGCKMAFNIKKSLKSHTLYKHGDALPLKCSVSGCKRSFRKK
SALRIHLSEHSKESLSVCDLPGCGWKSTSATELKAHQRRHGGYRCSHEGCQTISPTWTAL
QTHLEKHPLELQCATCKKPFKKASALRRHKATHDKKPLKLPCPRQDCDKTFNTVFNLTHH
VRKVHLCLQTHRCYHAGCNRSFAMRESLLRHLVVHDPERKKLKLKLGRRPPKFRGRGARC
PTPVVEEDLTNLFSQKLLFHYKTRLETNLSGLFNERQLREPAEPEVNLSGLFQLPQGRAR
AEKAA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgttgggcaaactataccaggcaagttgcaggcgttccgctgcccagcggcg
gggtgtatggccacctacagaaaggaggggaagctccgggaccatatggctgggcacagt
ggacagaagccatggaaatgtagcaaaaaagactgcggcaaagtgtttgcccgaaaaagg
caaatccagaagcacataaagtgccatctgatactgaagaaatacagctgttccgctgct
ggctgcaagatggcgttcaacatcaagaaaagcctgaagagccacactctgtataaacac
ggggatgccctgccccttaagtgctcggtgtcggggtgcaaaagaagcttccggaagaaa
agtgcgctgagaatccacctgtcggagcacagtaaggagtcgctgtctgtctgtgacctc
cctgggtgtggatggaagtcgacgtctgcgaccgagctcaaagcccaccagaggcgacat
ggcgggtaccgttgttctcacgaaggctgccaaaccatttccccgacttggactgccctc
cagacgcaccttgagaagcacccattggagctccagtgtgccacatgtaagaagccattc
aagaaggccagtgccttgcgtaggcacaaagccacccatgataagaagccactcaagcta
ccgtgtccacggcaggactgtgataaaaccttcaatacggtgttcaatctgacgcaccac
gtgcgcaaggtccatctgtgcctacagacccaccggtgctaccatgctgggtgcaaccgc
agctttgccatgagggagagcctgcttcgccatcttgtggttcatgatcctgaaaggaag
aagttaaagttgaaacttggacgtcgccccccaaaattccgtgggcggggagcccgttgc
cctacgcctgtagtagaagaggatttgaccaacctctttagccagaaacttctcttccat
tacaagacccgcctggagaccaacctgtctggtctgtttaatgagcgccaactccgggag
cccgcggaaccagaggtcaaccttagcggcctgttccagctgccccagggccgtgccaga
gctgaaaaagcagcctaa
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integrated database retrieval system
