Xenopus tropicalis (tropical clawed frog): 548888
Help
Entry
548888 CDS
T01011
Symbol
tfdp1
Name
(RefSeq) transcription factor Dp-1
KO
K04683
transcription factor Dp-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083
Polycomb repressive complex
xtr04110
Cell cycle
xtr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
548888 (tfdp1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
548888 (tfdp1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
548888 (tfdp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
548888 (tfdp1)
03036 Chromosome and associated proteins [BR:
xtr03036
]
548888 (tfdp1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
548888 (tfdp1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
548888 (tfdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
FMP23
Motif
Other DBs
NCBI-GeneID:
548888
NCBI-ProteinID:
NP_001011211
Xenbase:
XB-GENE-1219073
UniProt:
Q5M8Z8
LinkDB
All DBs
Position
2:complement(115815845..115843103)
Genome browser
AA seq
411 aa
AA seq
DB search
MAKDVGLIEANGELKVFVDQNLSPEKGVVSLLTVHPSSVSSIGKQLLPKTFGQSNVNITQ
QVVLGTPQRQSAPNTILIGSPHTPNTHFVSQNQVTDSSPWSAGKRNKKGEKNGKGLRHFS
MKVCEKVQKKGTTSYNEVADELVAEFSSADNHISPNESQAYDQKNIRRRVYDALNVLMAM
NIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQR
NRLTEQKANRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEV
LKRMGMACGLESGSCSAEDLKTARSLVPKALEPYVTEMAQGSISSVYISSSSGSVSNGRR
FSSSDLTGCTDSMLATSSNGSQYSSSRVETPVSYVGEEDDDDEDDFNDDDD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatgttggtcttatagaagcaaatggagaacttaaggtttttgtagaccag
aatcttagccctgagaaaggtgtagtgtcattattgactgtccatccatcatcagtcagt
tccattggaaaacagctgctgccgaaaacgtttggacagtccaatgtaaacattactcag
caagtggttcttgggacaccacagagacagtctgcaccaaatactatacttataggaagt
cctcatacgcctaatacacattttgtatcacagaaccaagttacagactcttcaccatgg
tctgctggaaaaagaaataaaaaaggtgaaaagaatggcaaaggtttgcgtcatttctcc
atgaaggtttgtgagaaggtgcagaagaaaggcacaacgtcttacaatgaagtagctgat
gaactggttgcagaatttagttcagcagataatcatatatctccgaatgaatctcaagca
tatgaccagaaaaatattagacgacgagtctatgatgccttaaatgtgcttatggctatg
aacataatttctaaagaaaagaaggaaataaagtggattggtttacctacaaactctgct
caggaatgtcaaaatttagaggttgaaagacaaagaagacttgaacgaataaagcaaaag
caatctcagctacaagaacttatactacagcaaattgctttcaaaaacctagttcagaga
aatcgtcttacagaacaaaaagcaaacagaccacccccaccaaattcagtcatacattta
cccttcatcattgtgaacaccagcaagaagacagtgattgactgtagcatttctaatgac
aagtttgaatacttatttaattttgacaacacatttgaaatacatgatgatattgaagta
ctgaagcgaatgggaatggcttgtggcctagaatcaggaagctgttcagctgaggacctt
aagactgcgagaagcttggtgccaaaagctctagaaccatatgtgacagaaatggctcag
ggatcaattagcagtgtgtatatctcatcttcatcaggttcagtgtctaatggcagaagg
ttttcatcaagtgacttgactggctgcacagatagcatgttagctacgagttcaaatgga
tcccagtacagcagttcccgagttgagactcctgtgtcgtacgttggagaggaagatgat
gacgatgaggatgattttaatgatgatgatgactga
DBGET
integrated database retrieval system