Xenopus tropicalis (tropical clawed frog): 548900
Help
Entry
548900 CDS
T01011
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
548900 (eri1)
03036 Chromosome and associated proteins [BR:
xtr03036
]
548900 (eri1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
548900 (eri1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
548900 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
SAP_new25
DUF2193
Motif
Other DBs
NCBI-GeneID:
548900
NCBI-ProteinID:
NP_001016146
Xenbase:
XB-GENE-974172
UniProt:
Q28FF6
LinkDB
All DBs
Position
1:complement(98031277..98039066)
Genome browser
AA seq
345 aa
AA seq
DB search
MEEQKENRPLHTEDEDDLCRKLSKNLDFAGGKQRCRLDGQEDTGNSTISSHASDFSDPVY
KEIAIANGCVNRMTKDELKAKLAEHKLDTRGVKDVLRKRLKNYYKKQKLRHALHKDSNTD
CYYDYICVIDFEATCEEGNSTDYTHEIIEFPIVLLNTHTLEIEDVFQRYVRPEINPQLSE
FCVNLTGITQDIVDKSDIFPDVLRSVVDWMREKELGTKYKYAILTDGSWDMSKFLNMQCR
VSRLKYPRFAKKWINICKSYGNFYKVPRTQTKLTTMLEKLGMTYDGRLHSGVDDSKNIAR
IAAHMLQDGCELRVNERMHAGQLMTVSSSLPFEGAPVPQNPQLRN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagaaagaaaatcggccgctacacacggaggatgaggatgatttgtgcaga
aagctctccaaaaacttggatttcgctggtggcaagcagaggtgtcgattggacggtcag
gaggacactggaaattctacaatatcctcacatgctagtgacttcagtgatccagtttat
aaagaaattgccattgcaaatggttgtgtcaatagaatgactaaggatgagctgaaggca
aagcttgcagagcacaaacttgacactagaggtgttaaagatgtgctgaggaagagattg
aagaattactacaagaagcagaaactgagacatgcattacataaggactcaaacacagac
tgctattatgattacatctgtgtcattgactttgaggcaacctgtgaagagggtaactct
acagactacacccatgaaataatagagttccctatcgtcttactcaatacacacacactg
gaaattgaggatgtatttcagcgctacgtgagaccagaaattaatcctcaactttctgaa
ttttgtgtcaaccttacaggtataactcaggatattgtagacaaatcagacatatttcca
gatgttcttcgtagtgttgtggactggatgcgtgaaaaggagcttggaacaaaatacaaa
tacgcgatacttactgatgggtcctgggatatgagcaagtttctaaacatgcagtgtcgt
gttagtcgcctaaaataccctcgatttgcaaagaagtggatcaacatttgcaaatcttat
gggaatttctacaaggtaccacggactcagacaaagttgaccaccatgctggaaaaattg
ggcatgacctatgatggacgtctgcacagtggcgtggatgattctaagaacattgctcgc
attgcagctcatatgcttcaggatggctgcgagcttcgtgtaaatgagaggatgcatgca
gggcagttaatgactgtgtctagctctttgccttttgaaggggctccagttcctcaaaat
ccacagctgagaaattag
DBGET
integrated database retrieval system
