KEGG   Xenopus tropicalis (tropical clawed frog): 548922
Entry
548922            CDS       T01011                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    548922 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    548922 (taf12)
   03036 Chromosome and associated proteins [BR:xtr03036]
    548922 (taf12)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     548922 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     548922 (taf12)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     548922 (taf12)
    STAGA complex
     548922 (taf12)
    TFTC complex
     548922 (taf12)
    SAGA complex
     548922 (taf12)
    SLIK complex
     548922 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF10 DUF5827
Other DBs
NCBI-GeneID: 548922
NCBI-ProteinID: NP_001016168
Xenbase: XB-GENE-943294
UniProt: B0BLT7
LinkDB
Position
2:complement(78441251..78453464)
AA seq 166 aa
MNQFGASALINLSSFSSSTTTTTTPTSVAVKQEPVMANSTPVGKVPVPTAGGGRASPDAN
QVLTKKKLHDLVREVDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKD
VQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIKKTQKK
NT seq 501 nt   +upstreamnt  +downstreamnt
atgaaccagtttggagcatccgcattgatcaacctgtcaagtttctcctcctctacaacc
accaccaccactcctacctcagtcgcggtcaaacaggagccagtcatggcaaacagtact
ccagttggtaaagttccagtgccaactgctggaggagggcgtgcaagtccagatgcaaat
caggttcttactaagaagaaactgcatgatttggttagagaagttgatcccaatgaacag
ctggatgaagatgtggaggagatgcttctacagatcgcagatgatttcattgagagtgtg
gtatctgcagcctgccagcttgcccgacaccgcaaatccaacactttagaagttaaggat
gtacagcttcatcttgagagacagtggaacatgtggattccaggctttggttcagaagaa
attcggccctataaaaaggcttgtactactgaagcacataaacagagaatggctttaatt
aagaaaacacaaaagaaataa

DBGET integrated database retrieval system