Xenopus tropicalis (tropical clawed frog): 548967
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Entry
548967 CDS
T01011
Symbol
tob2
Name
(RefSeq) protein Tob2
KO
K14443
protein Tob/BTG
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
548967 (tob2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
548967 (tob2)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
548967 (tob2)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
548967 (tob2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
548967
NCBI-ProteinID:
NP_001016213
Xenbase:
XB-GENE-6454214
UniProt:
Q28CL2
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All DBs
Position
4:120366082..120376866
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AA seq
298 aa
AA seq
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MHLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKGKYEGHWYPEKPLKGSGYRCVHI
GETVDPVVEQAARRSGLDIDDVLANVPEELSVWIDPFEVSYQIGEKGSVKVLYLEDVENS
TELDKEIKSSFNPEAQAFIPITNQETSLSNSPSPSFGQSPSPTFIPRASQPMTFTTATFA
ATKFGSTKMKKGGQRMARSPTNNLVKHKGLSLSMHSLNFSPAQGAPSQLSPNAKEFVFSG
APGLFYDGDNQSLPSPGPFATPFASGSSLFAEKSPFVEGLNFNLPYSSQPFQPVVLAN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggagattaaagttgccctgaatttcattatttcctacttgtataataaactt
ccaagaagaagagctgacctgtttggagaggagttagaaaggcttttaaagggcaaatat
gaggggcactggtacccagagaaaccactgaaaggttctgggtatcgatgtgttcacatt
ggagagactgttgatccagttgtggagcaggctgctcgaaggagtggattagatatagat
gatgtacttgcaaatgttccagaagaattgagtgtgtggattgacccatttgaagtgtct
tatcagattggagaaaagggatcagtgaaggtgttgtatcttgaagatgtggaaaacagc
actgagttggacaaagaaataaagagtagtttcaaccccgaggcacaggcattcatcccg
atcactaaccaggaaacctctttatctaattctccatctccgtcatttggtcaatcccca
agccccacatttattccccgggcctcccagccaatgacctttacaacagcaacctttgca
gccaccaagtttggctcaactaagatgaagaaaggaggtcagcgcatggcacgttcccca
actaataacctggtgaaacataaaggtctttctctgtcgatgcattcgctaaactttagc
ccagcccagggggctccatctcagctgtctcccaatgccaaggagtttgtttttagtggt
gctcctgggctcttttatgatggcgacaaccagagccttccaagcccagggccatttgcc
actccctttgccagtgggagcagcctttttgctgagaaatctccttttgttgaagggtta
aacttcaaccttccttactcaagccaacctttccagcctgttgtcctggctaattaa
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