Xenopus tropicalis (tropical clawed frog): 549011
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Entry
549011 CDS
T01011
Symbol
chrd.1
Name
(RefSeq) chordin precursor
KO
K04657
chordin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
549011 (chrd.1)
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
Motif
Other DBs
NCBI-GeneID:
549011
NCBI-ProteinID:
NP_001136129
Xenbase:
XB-GENE-480638
UniProt:
B5DEB6
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Position
5:99617614..99632788
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AA seq
941 aa
AA seq
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MLCSPILLLWTLWIMAVDCSRPKVFLPIQPEQEPLQSKTPAGCTFGGKFYSLEDSWHPDL
GDPFGVMHCVLCYCEPQRSRRGKPSGKVSCKNIKHDCPSPSCSNPVLLSGHCCKTCPKAP
PPPIKKSDFVFDGFEYFHGKDDDLYNDRSYLSSDDVTVEENRSEYVALLTAPSHVWPPVT
SGVAKARFNLQRSSLLFSITYKWIDRLSRIRFSDLEGSVLFEHPVHRMGSPRGDTICGIW
RSLNRSTLRLLRMGHILVSLVTTTLSEPEISGKIVKHKALFSESFSALLTPEDSDVTGGG
GLAMLTLSDVDDNLHFILMLRGLRGGERDQIQILVQILHQNHVIRELYANISAQEQDFAE
VLPDLSSREMQWLAQGQLEISVQTEGRRGQRMSGIITVRKSCDTLQSVLSGGDTLNPTKT
GAVGSASITLHENGTMEYQIQIAGTTSAVTAVTLETKPRRKTKRNILHDMTKDYQDGRVW
GYWIDANARDLHMLLQSELFLNVATKDFQEGELRGQITPLLYSGLWARYEQLPVPLAGQF
VSPPIRTGSAGHAWVSLDEHCHLHYQIVVTGLGKAEDAALNAHLHGFAELGEVGESTPGH
KRLLKGFYGSEAQGSVKDLDLELLGHLSRGTAFIQVSTKLNPRGEIRGQVHIPNNCESGG
VSLTPEEPEYEYELYEEGRQRDPEDLRKDPRACFFEGQLRAHGSRWAPDYDRKCSVCSCQ
KRTVICDPIVCPPLNCSQPVHLSDQCCPVCEEKKEIREVKKTERARTANEGCFFDGDRSW
KAAGTRWHPFVPPFGLIKCAICTCKGSTGEVHCEKVTCPRLSCTNPIRANPSDCCKQCPE
ERSPLELADSMQSDGPRSCKFGRHWYPNNERWHPTVTPFGEMKCVTCACVEGVTPCRRQE
CTGNTCGTGSKRDRCCTKCKDAKQDEDEKVKSEETRTPWSF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgctttgttcccccatcttacttctgtggaccctgtggattatggctgtggattgctct
cgcccaaaggttttcctgcccattcagcctgaacaggagcccctccaatctaagacacca
gcaggttgtacgtttggtggaaaattttactctctggaggattcatggcatccagatctt
ggggatccattcggagttatgcactgtgtattatgctattgtgagccgcagcgaagtcgc
cggggaaaaccatctggcaaagtcagctgcaaaaacatcaaacatgattgcccctcaccc
tcctgttctaaccctgtcctgctttctggacattgctgcaagacttgtcccaaagctcct
cctcctcctataaagaaatcagactttgtttttgatggattcgagtattttcatgggaag
gatgatgatctttataatgatcgctcttaccttagttctgatgatgtcactgtggaggag
aatcgttcagaatatgttgcattattaacagcacccagccacgtgtggcccccagttacc
agtggagtagccaaggctcgattcaatctgcagcgctccagtttgctcttctcaatcacc
tataaatggatagacagactttcccgaatccgcttctccgatcttgaaggttctgtgctg
tttgaacacccagtgcacagaatgggatccccacgaggtgacactatctgtggtatttgg
aggtctctaaatcgctcaactctacgtcttctccgcatgggtcacattctggtatctttg
gtgaccacaacactttcagagcctgaaatatcaggcaagattgtcaaacacaaagccctg
ttttcagagtccttcagtgcacttcttaccccagaagactctgatgtaacaggaggtgga
ggactcgcaatgcttacactaagtgacgtggatgacaatctgcactttatccttatgctc
agaggtcttcgtggtggagaaagagatcagattcaaatacttgtgcaaatcttgcatcag
aaccatgtgatacgggagctttacgctaacatctctgcacaggaacaagactttgcagag
gtgttgccagacctctcaagccgtgagatgcagtggctggcccaaggtcagctggagatt
tcagtgcagacagaagggagacgtgggcaacgcatgtcaggcatcatcacagtcagaaaa
tcatgtgacacactgcagagtgtgttgtctggtggtgacactttaaatcccaccaaaact
ggagctgtgggatctgcaagcatcacactgcatgaaaatggaaccatggaatatcagatt
caaattgctggtaccacaagtgctgtgacagcagtgacactggagacaaaacctcgcaga
aaaacaaagagaaatatactgcatgatatgaccaaggactaccaagatggaagggtctgg
ggatactggatagatgctaatgcacgagacctacatatgctgttgcaaagtgagctcttc
cttaatgtagcaacaaaggatttccaggaaggggaacttagaggtcaaataacccctctg
ctatacagcggcctttgggccagatatgagcagctcccagttcctctagctggtcagttt
gtgtcaccacccatcaggacaggctcagcaggtcacgcatgggtttcactggatgagcac
tgccatctgcattatcagattgtggtgactggtctgggtaaggcagaggatgctgcactg
aatgctcatctccatggttttgctgagcttggtgaagtcggtgagagtacccctgggcac
aagaggttgttaaagggcttctatgggtcagaggcccagggtagtgtaaaagaccttgat
cttgaacttttgggacatctgagccggggcacagcatttatccaagtgagcaccaaactg
aaccctcgtggtgaaattcgaggacaagtgcacatacctaacaactgtgaatctggagga
gtctctctaactcccgaggagcctgagtatgaatatgaattatatgaggagggaaggcag
cgagacccagaagatcttcggaaagatcctagagcatgcttttttgaaggtcaactaaga
gcccatggttcacgatgggctccagattatgacaggaaatgctctgtgtgcagctgtcag
aaacgtaccgtgatctgtgatcctattgtgtgcccacctctgaactgctcccagcctgtc
catttgtcagatcagtgttgtcctgtgtgcgaagaaaaaaaagaaattagagaggtaaaa
aaaaccgagagagctcgcacagcaaatgaaggctgcttctttgatggagatcgctcatgg
aaggcggctggtacacgttggcatccttttgttcctccatttggtctaattaaatgtgct
atttgcacctgcaagggttccactggagaagtgcattgtgagaaggtgacctgtccacga
ctttcctgtaccaacccaattcgtgctaatccatctgattgctgcaaacagtgcccagag
gagcgaagtcctttggagctggcagacagtatgcagtcagatggaccgcgatcatgcaaa
tttgggcgtcactggtaccctaataatgagcgctggcatccaactgtgacaccctttgga
gagatgaagtgtgttacatgtgcttgtgtggagggagttacaccgtgtcggagacaggag
tgtacaggaaatacatgtggtactggttcaaagcgggacagatgttgcaccaagtgcaaa
gatgccaagcaagatgaagatgaaaaggtgaaatcagaggagacaaggactccgtggagt
ttctag
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