Xenopus tropicalis (tropical clawed frog): 549031
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Entry
549031 CDS
T01011
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
549031 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
549031 (gtf2b)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
549031 (gtf2b)
Prokaryotic type
Archaeal type
TFB
549031 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
549031
NCBI-ProteinID:
NP_001016277
Xenbase:
XB-GENE-494448
UniProt:
Q28G23
LinkDB
All DBs
Position
4:105692398..105701851
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AA seq
316 aa
AA seq
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MASTSRIDALPKVTCPNHPDALLVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKA
AKDPSRVGDAQNPLLSGGDLTTMIGKGTGAASFDEFGNNKYQNRRTMSSSDRAMMNAFKE
ITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETNVDLITTGDFMSRFCSNLGLTKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagtcgcattgatgcacttcccaaggtaacttgcccaaaccatcctgat
gcccttctggtagaagattatagggctggggatatgatctgttcagaatgcggattggta
gtgggtgatcgagttattgatgttggatctgaatggagaacatttagcaatgataaagct
gctaaagatccttctcgagttggagatgcacagaatcctcttttaagcgggggagacctg
actacaatgattggcaaggggacaggtgctgcaagctttgatgaatttggaaacaacaaa
tatcaaaatcgcaggactatgagcagctctgacagagcaatgatgaatgctttcaaagaa
ataacgaacatggcagacagaattaaccttcctcgcaacatagttgatcggactaataat
ttatttaagcaggtatatgagcaaaaaagtctaaaagggaggagcaatgatgctatagct
tctgcatgcctctatattgcctgcagacaggaaggggtccctagaacatttaaagaaatc
tgtgcagtatcaagaatttccaagaaggaaattggcagatgttttaaactcatcctgaaa
gctcttgagacaaatgtggatttgataactactggagattttatgtcacggttctgctca
aatctgggccttactaaacaggttcagatggcagctactcacatcgcacgcaaagctgtg
gagctagacttggttccagggagaagtccaatctctgtggcagctgctgccatttacatg
gcgtctcaagcatctgctgagaagagaacacagaaggagattggtgacattgcgggagta
gctgatgtgaccataaggcaatcttacagactgatatacccacgagcacctgacttgttt
cctgcagacttcaagtttgacacaccagttgacaaattacctcaactataa
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