Xenopus tropicalis (tropical clawed frog): 549068
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Entry
549068 CDS
T01011
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
549068 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549068 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
549068 (vps28)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
549068 (vps28)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
549068 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
549068 (vps28)
Exosomal proteins of colorectal cancer cells
549068 (vps28)
Exosomal proteins of bladder cancer cells
549068 (vps28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
DAHL
YxzC
Motif
Other DBs
NCBI-GeneID:
549068
NCBI-ProteinID:
NP_001016314
Xenbase:
XB-GENE-5776981
UniProt:
A0A8J0S6E3
Q28GA6
LinkDB
All DBs
Position
2:127514..136830
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AA seq
221 aa
AA seq
DB search
MFHGIPAPANIGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKDC
VSPSEYTAACSRLLVQYKAAFKQVQGAEVGSIDDFCRKYRLDCPLAMERIKEDRPITIKD
DKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSHLPPDFEGREKV
SQWLQKLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggattcctgccccggccaacattggggctcccggaaataagcctgaactg
tatgaggaagtgaagttgtacaagaatgcgcgggaacgagagaagtatgataacatggcg
gaactgtttgcggttgttaagacgctgcaggcgctagagaaggcatacattaaggattgt
gtatcccccagcgaatacacagcggcctgctctcgcctcctggtacagtacaaagctgcc
ttcaaacaggtgcaaggggccgaggttggatccatcgatgatttctgccggaaatacagg
cttgactgccctttggccatggaaagaataaaagaggatcgaccaatcaccatcaaggat
gataaagggaatctgaaccgctgcattgctgacattgtatctctcttcatcactgtcatg
gacaaactgcgcctggagatccgcgccatggatgagatccagcctgacttgcgggagtta
atggagaccatgaacaggatgagccacctccctcctgattttgagggacgggagaaagtg
agtcagtggttacagaagctcagcagtatgtcggcgtcggatgaactggatgattcccaa
gtgcggcaaatgttgttcgatttagaatctgcctacaatgccttcaatcgcttcctccat
tcctaa
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integrated database retrieval system
