Xenopus tropicalis (tropical clawed frog): 549091
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Entry
549091 CDS
T01011
Symbol
pou2f1
Name
(RefSeq) POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
549091 (pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
549091 (pou2f1)
03021 Transcription machinery [BR:
xtr03021
]
549091 (pou2f1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
549091 (pou2f1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
549091 (pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Ntox15
Motif
Other DBs
NCBI-GeneID:
549091
NCBI-ProteinID:
NP_001016337
Xenbase:
XB-GENE-853992
UniProt:
Q28BL7
LinkDB
All DBs
Position
2:complement(6959006..7044526)
Genome browser
AA seq
757 aa
AA seq
DB search
MKLHSSSKIPNHAWLSDARMNNPSETSKSSESGDGNTGTQTNGLDFQKQAVPIGAITSAQ
AQALLGHLHQVQLAGTSLQAAAQSLNVQTKFKEEPGEPTQAVQPSQQPSLQAAIPQTQLM
VAGGPITGLTLTPAQQQLLLQQAQAQLLAAAVQHSASQQHSAAGATISASAATPMTQIPL
SQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLPPAQFIISQTPQGQQGLLQAQNLLT
QLPQQSQANLLQSQPSITLTSQPATPTRTIAATPVQQLPQSQTTPKRIDTPSLEEPSDLE
ELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLL
EKWLNDAENITSDSSLSNQSVLNSPGHGMEGLNRRRKKRTSIETNIRVALEKSFLENQKP
TSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGSSSSPIKSLFSSANPLVATT
PSLVTSSTATTLTVNPVLPLTSAAAITSFPVPGTTGTSSANTATVISTAPPVSSVLTSPS
LSPSPSATAATSEASTASGTSTTHTTSTPLTSPLSTGQVMVTASGIHTAATALQGAAQLP
TSASLAAMAAAAGLNPGLMAPSQFAAGGALFSLNPGALGSALSPALMSNSTLATIQALAS
SGSLPITSLDATGNLVFANAGGTPNIVTAPLFLNPQNLSLLTSNPVSLVSAASTGVTGPI
TSLHATTSSVDSVQNTLFTVASASGAASTTTSASKAQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcattcttcttccaagattccaaaccatgcctggctgtcagatgcaagaatg
aacaatccgtcagaaaccagtaaatcatcagagagcggggatggaaacacaggcacccaa
acgaatggcctggactttcagaaacaagcggtgcccatcggagccatcacatcagcccag
gcacaggctttgctcggacatctccaccaggtccagctcgctggcacaagtttacaggct
gctgcacagtccttaaatgtacagactaaatttaaagaagagcctggggagccgacgcaa
gcggtgcagccttcccagcagccctcactgcaggcagccatcccccagactcagctcatg
gtagctggcggaccaatcactgggctcacactgacgccggcccaacagcagctgctacta
cagcaggcccaggcccaactactcgcagccgcggtgcagcattctgccagccagcaacac
agcgccgccggtgccaccatctccgcctctgccgccactccaatgacacagattcccctg
tctcaaccaatacagattgcacaggatttacagcagctgcagcagcttcagcaacaaaat
cttaacttgcagcaatttgtgttggtgcatccaaccaccaacctgccgccagcgcaattc
atcatctcacagacgccgcaggggcagcaaggcctcctgcaggcgcagaatctcttaact
caactacctcagcaaagccaagccaacctcctgcagtctcagccaagcatcaccctcacc
tcacagccagcaacccccacgcgcacaatagctgcgacccctgtacagcaacttccacag
agccagacaacaccaaagcgaatcgacaccccaagcctggaggagcccagcgaccttgag
gagcttgagcagtttgccaagacgtttaaacaaagacgcatcaaactcggattcactcag
ggtgatgtggggcttgctatgggcaaactctatggcaatgacttcagccaaactactatc
tcccgcttcgaagccttgaaccttagctttaaaaatatgtgcaagttaaagcctcttctg
gaaaagtggctcaatgacgccgaaaacataacgtctgactcttccctgagcaaccaaagt
gttctgaactcgccaggacatgggatggaagggctgaatcgcaggaggaagaaacgcacc
agcatagagaccaacatacgagtggccttagagaagagtttcctggagaaccaaaagcct
acctcggaggagatcaccatgatcgcagaccagctgaacatggagaaagaagtgatccgt
gtctggttctgcaaccggcgccagaaagagaaacggataaaccccccgagcagcggtgga
tccagcagttctcccattaaatcactgttctccagtgcaaatccgctggtggccactacc
ccgagcctagtgaccagtagtacagcaaccacactgactgtaaacccagtgctcccgctt
acaagtgctgctgctataaccagctttcctgtcccaggcacaacaggaacttcctcggcc
aacacagcaactgtgatctcaacggcgccccctgtatcctctgtcctgacgtctccatct
ctaagtccttccccctcggctactgcggcaacatcggaagcgtccacagccagcgggacg
agcacgacgcacaccacatccactccattgacctctccattaagcactggccaagtcatg
gtgactgcatccggaatccacacggcggctacagcactacagggcgcagcacagttgcct
accagtgcaagtcttgctgccatggctgctgcggcaggactgaacccagggcttatggcg
ccctcacagtttgccgctggaggtgccttatttagcctcaatccaggtgccctggggagt
gcccttagccctgctctcatgagtaacagtacactggcaacaattcaagctcttgcatct
agtggatctcttccaataacatcactggatgctactgggaacttggtctttgccaacgct
ggagggacccctaacattgtgactgcccctttattcctcaatcctcagaacctttctcta
ctcaccagcaaccccgttagcttggtctctgcagcctccactggggttactggccccatc
acaagccttcatgccaccacctcttcggtcgattccgtccagaacacactatttaccgtg
gcctctgccagcggagctgcttccaccacaacatcagcctccaaggcacaatga
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