KEGG   Xenopus tropicalis (tropical clawed frog): 549097
Entry
549097            CDS       T01011                                 
Symbol
polr2l.1
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03020  RNA polymerase
xtr03420  Nucleotide excision repair
xtr04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    549097 (polr2l.1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    549097 (polr2l.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    549097 (polr2l.1)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    549097 (polr2l.1)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     549097 (polr2l.1)
  RNA polymerase III system
   RNA polymerase III
     549097 (polr2l.1)
  RNA polymerase I system
   RNA polymerase I
     549097 (polr2l.1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      549097 (polr2l.1)
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 549097
NCBI-ProteinID: NP_001016343
Xenbase: XB-GENE-1003788
UniProt: Q28GI6
LinkDB
Position
4:31238144..31242293
AA seq 67 aa
MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL
NYAPLEK
NT seq 204 nt   +upstreamnt  +downstreamnt
atgatcatcccagtcaggtgctttacatgtgggaagattgtaggcaataaatgggaggca
taccttggccttttgcaggctgaatatacagaaggtgatgcactggatgccttgggcctg
aaaaggtactgctgtcgccggatgcttcttgctcacgtcgacttgattgagaaactgtta
aactacgcccctttggagaaatga

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