Xenopus tropicalis (tropical clawed frog): 549140
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Entry
549140 CDS
T01011
Symbol
btrc
Name
(RefSeq) F-box/WD repeat-containing protein 1A
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04114
Oocyte meiosis
xtr04120
Ubiquitin mediated proteolysis
xtr04218
Cellular senescence
xtr04310
Wnt signaling pathway
xtr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
549140 (btrc)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
549140 (btrc)
04340 Hedgehog signaling pathway
549140 (btrc)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
549140 (btrc)
04218 Cellular senescence
549140 (btrc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
549140 (btrc)
03036 Chromosome and associated proteins [BR:
xtr03036
]
549140 (btrc)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
549140 (btrc)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
549140 (btrc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-TrCP_D
WDR55
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
F-box
WD40_like
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_HPS5
Beta-prop_VPS8
F-box_5
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
549140
NCBI-ProteinID:
NP_001016386
Xenbase:
XB-GENE-486122
UniProt:
Q28GV9
LinkDB
All DBs
Position
7:30529176..30631040
Genome browser
AA seq
534 aa
AA seq
DB search
MEGFSCSLQPPTASEREDCNRDEPPRKIIPEKNTLRQTKLANGTSSMIVPKQRKLSANYE
KEKELCVKYFEQWSECDQVEFVEHLISRMCHYQHGHINTYLKPMLQRDFITALPARGLDH
IAENILSYLDARSLCSAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQY
LFKNKPPDGKTPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQY
DDQKIVSGLRDNTIKIWDKNTLECKRVLMGHTGSVLCLQYDERVIITGSSDSTVRVWDVN
TGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV
VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW
DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL
VEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAHAESTRSPSRTYTYISR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggaaggattttcatgttctcttcagccaccaacggcctcagagagagaagactgtaac
cgggatgaaccgcctaggaagataataccagagaaaaatacacttagacagacgaaactt
gccaatggcacttccagcatgattgtgcccaagcagcgaaagctgtcagcaaattacgag
aaggaaaaagagctatgcgtcaagtattttgagcagtggtccgagtgcgatcaagtagag
tttgttgagcacctgatatctcgaatgtgccactatcagcatggacatataaatacatac
cttaagccaatgttacaaagggatttcatcaccgcactaccagcccgcggactagatcac
atagcagaaaacatactatcatacctggatgcaaggtctttgtgttccgcagaactggta
tgtaaggagtggtaccgagtgacctcagatggaatgctctggaagaagctcatagagagg
atggttaggacagattctctttggaggggactggcagaaagaagaggatggggtcaatat
ctatttaaaaacaaacctccagatgggaaaacaccaccaaattcattctacagagcactt
tacccaaaaattattcaagacatagagacaatagagtccaactggcgctgtgggagacac
agcttacaaagaattcactgcaggagtgaaacaagcaaaggggtgtactgcctgcagtac
gatgatcagaagatagtaagtggactcagagataacaccataaagatctgggataagaat
actttggagtgcaaacgagtgctgatgggccacactgggtcagttctctgcctgcagtat
gatgagagagtaatcataaccggctcttctgactctaccgtccgggtttgggacgtaaac
acaggagaaatgttgaacactctgattcaccactgtgaggctgtgctacatttgaggttt
aacaatggtatgatggtcacctgctccaaagatcgttccattgcagtgtgggacatggcc
tctgccacagatatcacattacgaagagttctagtaggccaccgagctgccgtaaatgtg
gtggactttgatgacaagtacatagtctctgcctctggtgatcgaacaataaaggtttgg
aacaccagtacatgtgaatttgtgcggacattgaatggccacaagcgtggtattgcttgc
ttacagtatcgagataggcttgtggtgagtggttcttctgataacacaatcagattgtgg
gacattgaatgcggagcatgtttgcgggttctggaaggacatgaagaactggttcgatgc
attcgctttgataacaagagaatagtcagtggagcatatgacgggaaaattaaagtgtgg
gaccttgtcgctgctttagacccccgtgcacctgcagggaccctgtgtctccggactctt
gtggagcattcgggcagagttttccgcctgcagtttgatgagttccagatagtaagcagc
tctcacgacgacactatcctcatctgggattttctcaacgacccagctgcacatgcagag
tcaacgcgttccccttctagaacatacacgtacatctccagataa
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