Xenopus tropicalis (tropical clawed frog): 549183
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Entry
549183 CDS
T01011
Symbol
rnf138
Name
(RefSeq) E3 ubiquitin-protein ligase RNF138
KO
K10668
E3 ubiquitin-protein ligase RNF138 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
549183 (rnf138)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
549183 (rnf138)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
549183 (rnf138)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf_C2HC_14
zf-C3HC4_3
zf-RING_6
zf-C3HC4_4
zf-Nse
zf-RING_10
Zn_ribbon_RlmA
zf-MIZ
zf-RING_5
zf-RING_4
zf-rbx1
U-box
Prok-RING_4
Trm112p
zf-UDP
RING_XB3-XBAT31
UIM_2
DZR_2
ROS_MUCR
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
549183
NCBI-ProteinID:
NP_001016429
Xenbase:
XB-GENE-1001373
UniProt:
Q28H49
A0A8J0PHR8
LinkDB
All DBs
Position
6:111876815..111884397
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AA seq
222 aa
AA seq
DB search
MAESTPFSAEITEEYICPVCQEILQTPVRTQTCQHVFCRKCFLMAMKSGGAYCPLCRGPV
SKSERSAPARASDIDLEMRMLLGGCMYCGKQVKLHYMKLHYKSCRKYQEEYGLSPKDPTI
QKDQKSTKCQDPKYKCPLCSEQNLSQRSLLEHCNNVHYYQEVEMVCPICATLPWGDPIQT
TGNIIAHLNARHRFNYQEFMNIHLDEEAQFQKAIENSYKLSR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctacaccattttctgctgaaataacggaagagtatatttgtccagtttgt
caagaaatacttcaaactccagtgagaacgcagacctgtcagcatgtcttttgcaggaaa
tgttttctgatggcaatgaagtcagggggtgcatattgtcccctttgccgtggacccgtt
agcaaaagtgagagatctgcccctgcaagagcatctgatattgacctagagatgagaatg
cttttgggaggatgtatgtattgtgggaagcaggtgaaactgcattacatgaagctccat
tacaaatcctgtagaaagtaccaggaggaatatggattatcaccaaaagatcccaccata
cagaaagaccaaaaatcaaccaaatgtcaggacccaaaatacaagtgcccactgtgctct
gagcagaatttaagtcaaaggagcctgctggagcactgtaacaatgtgcattactatcaa
gaggtggaaatggtttgccctatctgtgccactttaccctggggagatcctattcaaact
actgggaatattattgcccatctaaatgcaagacatcgatttaactatcaagagtttatg
aatatccacctagatgaagaggcacagtttcaaaaagccattgagaattcttacaaactt
tcaaggtga
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