KEGG   Xenopus tropicalis (tropical clawed frog): 549195
Entry
549195            CDS       T01011                                 
Symbol
sf3b5
Name
(RefSeq) splicing factor 3B subunit 5
  KO
K12832  splicing factor 3B subunit 5
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    549195 (sf3b5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    549195 (sf3b5)
Spliceosome [BR:xtr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    549195 (sf3b5)
 Complex B
    549195 (sf3b5)
 Complex C
   U2 SnRNP specific factors
    549195 (sf3b5)
SSDB
Motif
Pfam: SF3b10 BcGHD
Other DBs
NCBI-GeneID: 549195
NCBI-ProteinID: NP_001016441
Xenbase: XB-GENE-5845857
UniProt: A0A8J0PHL7 Q0VFD4
LinkDB
Position
5:58018718..58019295
AA seq 86 aa
MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAVAENES
KARVRFNLMEKMLQPCGPPADKPDDS
NT seq 261 nt   +upstreamnt  +downstreamnt
atgacagaccgatatactattcacagccaactggagcatctgcagtccaagtatatcggc
acgggccatgcggatactactaagtgggagtggctggtgaaccagcacagagactcttac
tgctcctacatgggccactttgatctgctcaattactttgccgtggctgagaacgaaagt
aaagcacgggtacgttttaacctgatggagaagatgctgcagccgtgtgggcccccagct
gataagcccgacgactcttaa

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