Xenopus tropicalis (tropical clawed frog): 549203
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Entry
549203 CDS
T01011
Symbol
rhbdd1
Name
(RefSeq) rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
549203 (rhbdd1)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
549203 (rhbdd1)
Peptidases and inhibitors [BR:
xtr01002
]
Serine peptidases
Family S54: Rhomboid family
549203 (rhbdd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UIM
DUF1751
UIM_2
Motif
Other DBs
NCBI-GeneID:
549203
NCBI-ProteinID:
NP_001016449
Xenbase:
XB-GENE-5753535
UniProt:
F6XDC6
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All DBs
Position
5:complement(118708035..118739093)
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AA seq
308 aa
AA seq
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MQRRQRGINAGLLLLFAQLFQFGVHNIPPVTLAALGLNIFLFLNPFKPLLEVCISVRDGY
YGRDWQRFLLSPFHHADDWHLYFNMVSLLWKGAKLERKLGSGLFATIIIVFSQLIGVVYV
ILEYGLAEFTGDPSYKMQCAVGFSGVLFALKVLNNYYHPGGSSNVFGILIPNKYACWAEL
VAIHLLSPGTSFVGHLSGILVGLLYTQGPLKKILISTASFSNGPSSTQRNFSYSGYSGYA
DDSYQQHSSSRSYDLYTGGFDEDEQLQQAIRESLHERDGHRRPQQNAPWSSAEQLSVEEI
RRRRLNRF
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaagacaaagagggataaatgctgggcttttgcttttgtttgcccaacttttt
caatttggggttcataatatcccacctgtaactttggcagcacttgggttaaatattttc
ctcttcttaaaccctttcaagccattattggaagtttgcattagcgtacgtgatggttat
tatggcagggattggcaacgtttccttctctctccattccaccacgcagatgactggcac
ctatatttcaacatggtatccttgttatggaaaggtgcgaaactggagcgcaagctaggc
agtggactttttgctacaattataattgtattttctcagttgattggagtggtctatgtc
attttggaatatggcttggcagaattcacaggtgatccctcctataagatgcagtgcgca
gtgggattctcaggtgtattatttgctttgaaagtgcttaacaactattatcacccagga
ggttcttcgaatgtatttggcatcctgatacctaataaatatgcttgctgggctgagctg
gtagcaattcacttgctttccccagggacctcttttgttggacatctctctggtatctta
gttggactgctctatacccaagggcctcttaagaaaatcctgataagtacagcttctttc
tcaaatggcccttcttccactcagagaaacttcagttattctggctactctggctatgca
gatgattcataccagcagcacagttcttcaaggagttacgatctttacacaggaggcttt
gatgaagatgaacaattacagcaagccataagggaaagtctccatgaaagagatgggcac
agaaggccccaacagaatgctccctggtcatcagcagaacaactttctgtagaagaaatt
aggagacggaggttgaaccggttttaa
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