Xenopus tropicalis (tropical clawed frog): 549207
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Entry
549207 CDS
T01011
Symbol
spast
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549207 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
549207 (spast)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
549207 (spast)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
549207 (spast)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
549207 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
MIT
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
NPHP3_N
AAA_24
AAA_2
DUF815
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
549207
NCBI-ProteinID:
NP_001016453
Xenbase:
XB-GENE-947839
UniProt:
Q05AS3
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Position
5:complement(44376514..44419013)
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AA seq
571 aa
AA seq
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MNSPGGRNDKKKPVTPAAETGPGPPTPPPPPAETQVLLAPPSLHKRNLYLFSYPLLAAFS
LLRFLAFQLGLLFVWFCERLSRRVMADKGSTAARTAAAPAQDRPQEPEVVRSYHQQAFQY
ISMALRIDEEEKDQKEQAIQWYKKGIEELEKGIAVTITGKGEQYDRARRLQAKMSTNLLM
AKDRLQLLEKGAVPKKKDPPSISSNSYSRVKAAPKSGSLGNRIPNCTGVSSSARQAGPNA
PSNRGAAGKNNTRTNKPTTPTTAVRKKDMKNLRNVDSNLANLILNEIVDSGPTVKFADIA
GQDLAKQALQEIVILPSIRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFN
ISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEF
LIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQ
GNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMAASEMRNIKYSDF
LSSLKKIKCSVSPSTLESYIRWNKEFGDTTV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggcggaagaaacgacaagaagaaaccggtgaccccagcggcggagact
ggtcccggcccgccgacgcctcctcctcctccagcagagacgcaggtcctgctcgccccg
ccctcactgcataagcggaacctttacctgttctcctaccccctgctcgccgctttctcc
ctgctacgcttcctggcttttcagctggggctgctgttcgtttggttttgtgagcggctt
tcccgtagggtcatggcggacaaagggagtacggcggcccgcacagcagcggctccagct
caggacaggccccaggagcctgaggtagtgaggagctatcaccagcaggccttccagtac
atctctatggcgctgcgcatcgacgaggaggagaaagatcaaaaggagcaagccattcag
tggtacaagaagggtattgaggaactggagaaaggaatagctgtaactataactggcaaa
ggtgaacaatatgacagagcccgtcgtttacaagctaaaatgtcaacaaacttgttaatg
gcaaaggatcgcttacagctactagaaaaaggggctgttcccaaaaaaaaagatccacca
tcgatttcaagtaactcttattctcgtgtaaaggctgctcctaagagcgggtcattgggc
aacagaatacctaactgtactggtgtatcatcttcagctaggcaagctggtccaaatgca
ccttctaacaggggagcggcaggaaagaacaacacaagaacaaataaaccaacaacaccc
actactgcagtacggaaaaaagacatgaaaaatttaagaaatgtagatagtaatcttgca
aacttgattttgaatgaaattgtggatagtggtcctactgtcaagtttgctgacattgct
ggacaagatctagccaagcaagccttgcaggagatagttattcttccttctatacgaccc
gagttatttactgggctaagagcgcctgcacgaggattgctgctgtttggtcctccaggg
aatggaaagactatgctggcaaaagctgttgctgctgaatcaaatgcaacattcttcaac
ataagtgcagcgagtctgacttcaaaatatgtgggagaaggtgaaaagctggtgcgtgca
ctcttttctgtggctagagaattgcaaccttccattatatttatagatgaggttgatagt
cttttatgtgaaagaagagaaggggagcatgatgcaagcagaagactgaaaactgaattt
ctaatagagtttgatggtgtacaatctgggggagatgacagagttcttgttatgggagca
actaacagaccacaggaacttgatgatgcagttctcaggagattcaccaagagggtttat
gtatctttaccaaatgaagagactagactcttacttctcaaaaatcttctgagtaaacaa
ggtaacccacttaatgagaaggaactgactcagttatctaggctgacagaaggatactct
gggagtgatataacagctttggcaaaagatgctgctttgggaccaatcagagagttaaaa
cctgaacaagtcaaaaatatggctgctagtgagatgagaaatataaaatattcagatttt
ctaagttcattaaagaagataaagtgcagtgtgagcccttcaaccttggaatcttatata
aggtggaataaggaatttggcgatactacagtttga
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