Xenopus tropicalis (tropical clawed frog): 549267
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Entry
549267 CDS
T01011
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03250
Viral life cycle - HIV-1
xtr04144
Endocytosis
xtr04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
549267 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
549267 (hgs)
04145 Phagocytosis
549267 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549267 (hgs)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
549267 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
UIM
FYVE_CARP1-2
CID
Motif
Other DBs
NCBI-GeneID:
549267
NCBI-ProteinID:
NP_001016513
Xenbase:
XB-GENE-1016033
UniProt:
Q28CS1
A0A8J0PHY9
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All DBs
Position
10:27597612..27614182
Genome browser
AA seq
755 aa
AA seq
DB search
MGRGSGTFERLLDKATSQLLLETDWESILQICDMIRQGDTQAKYAVASIKKKINDKNPHV
ALFALEVLESVVKNCGQHVHDEVANKQTMEELKELQKRQVEPNVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHNFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVVTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNKKGEGKSASGVELPPEYLTS
PLSQQSQVEDIPSMPPKKDESALQEEEELQLAIALSQSEAEEKERMRQKTTYSMYPKADP
TPITSSAPPVTTLYSAALNSSAPLAEEIDPELARYLNRNYWEKKQEEVRKSPTPSAPVPI
SEPAVLQGGDVPVTVMEQYQNGESEENHEQFLKALQNAVTTFLNRMKSNQMRGRSITNDS
AVLSLFQSINNMHPQLLEMLNQLDERRLYYEGLQDKLAQIRDARGALNALRDEHREKLRR
AAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQLRLEQQKQTIQMR
AQMPAFSLPYAQLQSLPATGGIMYPPSGPPAYPGTFSPSGSVEGSPMHGVYMNPSGQPAT
APYPAMQVQDPNMVNAYMYTAGCAPTAQQGQAVPTTNPTYTSYQPTPTQAYQNVASQSLP
SISQTASAGAVGYMGAQSVPMPYQPYNMQNLMSTLPGQDPSLSNLPSQQQPFIGGQQPMY
QQMPVVGGQQQPAQQPAVHGQQGTGGSEAQLISFD
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagcggaacgttcgagaggcttctggataaagccaccagtcaactcttg
ttagagacagactgggagtcaatccttcaaatatgtgacatgatccgtcaaggagacacc
caagctaaatacgctgttgcatccatcaagaaaaaaataaatgacaagaatccacacgtg
gctctttttgcattagaggttttggaatctgttgtgaagaactgtgggcagcatgtacac
gatgaggtggcaaacaagcaaactatggaagaactaaaggaattgcaaaagagacaggtg
gagcctaatgttcgcaataagatactgtacctgattcaagcttgggcccacgccttccgc
aacgagcctaagtacaaagttgtgcaggatacttaccagatcatgaaggtggaaggtcat
aacttcccagaatttaaagagagtgatgccatgtttgcagcagagagggctcctgattgg
gtggatgctgaggaatgtcaccgctgccgtgttcagtttggggtggtaacaagaaagcac
cactgcagggcatgtgggcagatcttttgtggaaagtgctcatccaagtactccaccatc
cccaagtttggaattgaaaaagaagtgcgtgtttgtgaaccctgctatgagcagctgaac
aaaaagggtgaaggtaaatctgcctctggtgtggaactgccacctgagtacctgaccagc
cctctttcccagcagtcgcaggtagaagacatcccctctatgccgcctaagaaggatgag
tctgccctgcaggaagaggaggagctacagctagcaattgccttgtcacagtctgaggct
gaagaaaaggagaggatgagacaaaagacaacatacagcatgtacccaaaagcagatccc
acccctatcacctcttctgctcctccagttacaacactttactctgctgccttgaattca
tctgctccccttgctgaagaaattgatcctgagctagctcgttacctgaatcgtaattac
tgggagaagaagcaggaagaggtcaggaaaagccctacaccctctgcccctgtcccaatc
agtgagcctgctgttcttcagggaggtgatgtgccagtgacagtcatggagcaataccag
aatggggagtcagaggagaatcacgagcagttcctaaaagctttgcagaatgcagttacc
acatttttgaaccgtatgaaaagcaaccaaatgcgtggcaggagcatcacgaatgactct
gctgtattatccctcttccagtccattaacaacatgcacccacagttgctagagatgctc
aatcagttggatgaaaggcgattgtactacgagggcctgcaagacaaacttgcacaaatt
cgggatgcgcgaggagcactgaatgctcttcgtgatgagcacagggaaaagctccggcgt
gcagcagaggaggctgagaggcaacggcaaatccaattggcgcaaaaactggagattatg
agacaaaaaaagcaggaatacctggagatgcaacgccagctggcaatccaacgtttgcag
gagcaggaaaaggagagacaattgcgactggagcagcagaaacagacaattcagatgaga
gcccagatgcctgctttctccctcccatatgcacagctacaatcactacctgcgactggg
ggcattatgtacccaccctctggaccccctgcctaccctggtacctttagcccatctggt
tctgtggagggttccccaatgcatggtgtgtatatgaacccatcaggacagccagccaca
gcgccataccctgccatgcaggttcaagatcccaacatggtgaatgcatatatgtacaca
gcaggatgtgctcccacagctcagcaggggcaggctgtaccaaccaccaacccaacatac
acgtcttatcagcccacacctactcaagcctaccagaatgtggcatctcagagccttccc
tcgatatcccagactgcttctgcgggtgcagtgggttacatgggtgcacagtctgtcccc
atgccttatcagccatataatatgcagaatcttatgtctactctgcctggtcaggaccca
tctcttagcaacctaccttctcaacagcagccattcattggtgggcagcaacccatgtac
cagcagatgccagttgtaggtggtcagcaacagcctgcgcagcagccagcagtacatggg
cagcaaggaacaggagggagcgaagcacaacttatctcatttgactaa
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integrated database retrieval system
